Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq59 277 2e-69
>seq59
Length=1145648
Score = 277 bits (306), Expect = 2e-69
Identities = 1193/1869 (64%), Gaps = 38/1869 (2%)
Strand=Plus/Minus
Query 122832 GATTACGAATACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTC 122891
|||| || ||||| ||||| || | |||||| | || |||||| || |||
Sbjct 142579 GATTTCGGGTACAACTATTTCGGCTTCAAAACACTGGAGCGTTCCTATTTGCTGAAGATC 142520
Query 122892 GAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCAC 122951
||| ||| | | || || ||||| ||||| |||||||| || || || | |||
Sbjct 142519 AAGGGTAAGATTGTGGAGCGACCGCAACACATGCTGATGCGCGTTGCCATCGGTATTCAC 142460
Query 122952 GGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACG 123011
|| ||||| || || | ||| || ||| || || | || | | || ||
Sbjct 142459 GGTGAAGACATTGATGCTGCCATCGAGACGTACAATCTGCTTTCCGAGCGCTACTTTACC 142400
Query 123012 CACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTT 123071
|| || || || |||| || |||| ||| || || ||| | || || || |||
Sbjct 142399 CATGCCTCACCGACCATGTTTGCGGCCGCTACGCAGCGTCCGCAGCTTTCGTCTTGCTTT 142340
Query 123072 TTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCG 123131
|||| ||| || || ||||| || ||||| || || || | | || ||
Sbjct 142339 CTGCTTACCATGTCGGACGACAGTATTGAGGGTATTTACGATACGCTAAAGCAGTGTGCA 142280
Query 123132 TTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGA 123191
|||||||||||| | |||||| || || ||||||||||| | | | | | |||
Sbjct 142279 CTGATTTCCAAATCGGCCGGCGGTATCGGGCTGAACGTGCACTGCATTCGCGCCAAAGGA 142220
Query 123192 AGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTAC 123251
| |||| |||| | || || | |||| | | | |||||||| ||||||
Sbjct 142219 ACGTACATCTCCGGCACGAATGGGATTTCGAACGGGTTGGTGCCGATGCTGCGCGTTTAC 142160
Query 123252 AATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCAAAGGCGCGATGGCGATC 123308
|| ||| | | ||| |||| || ||||| ||||| || ||||| | || |||
Sbjct 142159 AACAACACGGCCCGGTACGTGGATCAGGGTGGCAACAAGCGGCCCGGCGCCTTTGCCATC 142100
Query 123309 TATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGG 123368
|| || ||||| ||||||| ||| | | ||| ||| | || | || |||| ||
Sbjct 142099 TACCTCGAACCATGGCACGGGGATATATTCGAGTTTCTGGATCTGAAGAAAAACACCGGC 142040
Query 123369 GCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATG 123428
||| || | |||||||| |||| ||||| | ||| | || ||| |||| |||
Sbjct 142039 AAGGAGGAGGTGCGTGCCCGCGACATGTTCTACGCCCTGTGGATCCCGGATCTGTTCATG 141980
Query 123429 CGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTG 123488
| || || | | ||| ||||| || ||||| || | || ||||| |||
Sbjct 141979 CAGCGTGTGGAGGCGAACGAAATGTGGAGCCTGATGTGCCCACACGACTGCCCCGGATTG 141920
Query 123489 AGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAA 123548
||| || ||| | |||| || || ||||| | ||||||| || || |
Sbjct 141919 GCTGACACTTGGGGCGAAGAGTTCGAGAAGCTGTACACTGGGTACGAGCAGGAGGGTCGA 141860
Query 123549 CAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTT---ATTATCGAAACACAAGTC 123605
| | ||||| ||||| || | | ||| || |||||| | || ||
Sbjct 141859 TTTATACGCCAGGTGAAGGCACAGGACCTATGG---TTTGCCATCATCGAATCGCAGGTG 141803
Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665
||||| || ||||||||||| ||||| || || |||||| | || | |||||||
Sbjct 141802 GAAACGGGCGTTCCGTACATGCTGTACAAGGATGCGTGCAACCGCAAGAGCAATCAGCAG 141743
Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAG--CGATG 123723
||| | || || ||||| ||| ||||| || |||| || | || ||| ||| |
Sbjct 141742 AACATCGGCACCATAAAGTGTTCCAATCTGTGTACCGAGATAGTGGAGTACTCGTCGAAG 141683
Query 123724 CCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCG-TGAATCGTTGCGTCGAAAAC 123782
||| || | || ||||| |||||||| ||||| ||| |||| | || |||| |
Sbjct 141682 --GATGAAATAGCGGTGTGCAATTTGGCCTCGATC-GCGCTGAACATGTTTGT-GAAACC 141627
Query 123783 GG------CGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAAT 123836
|| || | | ||| | || ||| || | | || | | | |||
Sbjct 141626 GGACAAAACG-TACGACTTTGCCAA-GCTGAAGGATGTCGCGAAGATTTTGACGCGCAAT 141569
Query 123837 TTGAACAAAATTATCGATGTTAATTTTTATCCTTT---GGAGG--AAGCGCGTTTGTCTA 123891
||||||||||||||||| | || | ||||| | ||||| |||||| || |
Sbjct 141568 CTGAACAAAATTATCGATATAAACTACTATCCAGTACCGGAGGCGAAGCGC-----TCCA 141514
Query 123892 ATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGC 123951
| || ||||| ||| |||| | || |||| || ||||||| ||||| | ||
Sbjct 141513 ACATGCGGCACAGGCCGATCGGTATCGGTGTTCAGGGCATGGCCGATGCGTTCATTTTGA 141454
Query 123952 TGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAA 124011
||||| |||||||||||||| || || | ||| || ||||| ||||||||
Sbjct 141453 TGCGCTATCCGTACGAAAGCGAGGAGGCCCAAAAGCTGAACCAACAAATTTTCGAAACAA 141394
Query 124012 TTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAA 124071
| || ||||| || ||||| |||||||| || | || |||| |||||||||
Sbjct 141393 TCTACTACGGAGCATTGGAAGCGAGCTGTGAGTTGGCCGCCCGCGACGGACCGTACGAAA 141334
Query 124072 GTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACAC 124131
|||| || || |||| ||| ||| || |||||||||| |||||||| ||
Sbjct 141333 CGTACGAAGGGAGTCCGGTAAGCAAAGGCATCCTGCAGTACGAAATGTGGAAGAAGGAAC 141274
Query 124132 CGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTA 124191
|| | || | ||| | ||| || || || || || | | |||||| | || |
Sbjct 141273 CGTCGGATCTTTGGAATTGGGCCGAGTTGAAGGAAAAAATTGCAAAGCACGGCATCCGCA 141214
Query 124192 ACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACG 124251
| |||||| || |||| ||||| || || | || || ||||| || || |||||||
Sbjct 141213 ATTCGCTGCTGTTGGCACCGATGCCTACCGCTTCGACGGCACAAATCTTGGGTAACAACG 141154
Query 124252 AATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTC 124311
| |||||||| |||| ||| ||| | ||| || || || | ||||||| ||||
Sbjct 141153 AGTCCTTCGAACCGTACACGTCCAACGTTTACAATCGGCGTGTACTTTCCGGCGAGTTTC 141094
Query 124312 AAGTGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATGAAAACA 124371
| ||| | || || ||| || || | || ||| ||| | | ||| ||| | |||
Sbjct 141093 AGGTGGTGAACCACCATCTGCTGCAAGATTTGACAGCGATGGGTCTGTGGGATCTAGACA 141034
Query 124372 TGCGCAACGAAATTATTGCGGCCGGTGGCAGCG-TGCAGCGCATCGCTTCGATTCCGGAA 124430
|| ||| ||||| | | | || | || | || |||||| ||||| ||| |
Sbjct 141033 TGAAGAACCAAATTCTGTCCAACAACGG-ATCGATTCAAAGCATCGAATCGATACCGAAG 140975
Query 124431 CACGTCAAGC-AACTGTACAAAACCGTGTGGGAAATGAAAAATAAACGATTAATTGAAAT 124489
| | | || | ||||||||||| |||||||| || |||| | ||| | ||
Sbjct 140974 GAAAT-ACGCGATCTGTACAAAACGGTGTGGGAGATTTCGGTTAAAACGTGCATTAAGAT 140916
Query 124490 GGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGA 124549
||| | ||||| || |||| | ||||| ||||| || ||| | || || ||
Sbjct 140915 GGCTGCTGACCGGGGTGCGTTTATCGATCAGTCGCAATCGTTCAACATACACGTGGCCGA 140856
Query 124550 ACCCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGCGGACTCAAAAC 124609
||| | ||| | | |||| || ||| | ||| |||| | ||||| |||||
Sbjct 140855 ACCGAACTATGGCAAGCTGACATCGATCCACTTTTACGGCTGGAAAATGGGACTGAAAAC 140796
Query 124610 GGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669
||||||||| || | |||| |||||||| | |||| || || ||||| || |||||
Sbjct 140795 GGGCATGTACTATCTGCGAACAAAACCGGCCGTAAATGCGATCCAGTTTACGGTGGACAA 140736
Query 124670 ATCTAAACT 124678
| | || ||
Sbjct 140735 AACGAAGCT 140727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451871152915160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |