Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq59 120 4e-22 >seq59 Length=1145648 Score = 120 bits (132), Expect = 4e-22 Identities = 511/793 (64%), Gaps = 21/793 (3%) Strand=Plus/Plus Query 115908 GTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGT 115967 ||||| |||||| || || ||| |||| ||||||||||||||||| || || || || || Sbjct 141128 GTTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCGAAGCGGT 141187 Query 115968 GGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAG 116027 ||||| ||||||| || || ||||||| || | ||| |||||| | Sbjct 141188 AGGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGCAATTTTTTCCTTCAA 141247 Query 116028 GGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATA 116085 || |||| | | || | | || ||| || |||||| || |||| ||||| Sbjct 141248 CTCGGCCCAATTCCAAAGATCCGACG-GT-TCCTTCTTCCACATTTCGTACTGCAGGATG 141305 Query 116086 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 116145 |||| | | || || || | || || || || || || | ||||| || Sbjct 141306 CCTTTGCTTACCGGACTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCAACTCA 141365 Query 116146 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT- 116204 ||||||| || | ||| ||| || ||||| || ||||| | |||| || || Sbjct 141366 CAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCA--GCTTTT 141423 Query 116205 -GGCCTCGTCGGAATCAAACGCGAGACGGCA-CAAAATAAATACATCCGCGAGACCTTGG 116262 |||||| ||| || ||| || | ||| |||||| || |||| || | || || Sbjct 141424 GGGCCTCCTCGCTTTCGTACG-GATAGCGCATCAAAATGAACGCATCGGCCATGCCCTGA 141482 Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGA 116319 ||||||| || || || | || | ||| || || || | |||| || ||| Sbjct 141483 ACACCGATACCGATCGGCCTGTGCCGCATGTTGGAG---CGCTTCGCCTCCGGTACTGGA 141539 Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379 || | || ||||||||| | || ||||| || | || ||| | || || | Sbjct 141540 TAGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCGCGACATCCTTC 141599 Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 116439 ||||| | | || | | ||| | || ||| || | || ||||| || Sbjct 141600 AGCTTGGCAAAGTCGTACGTTTT-GTCCGGT--TTCACAAACATGTTCAGCGCGATCGAG 141656 Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499 |||| ||| ||||| | | |||||||| | |||||| | || || ||||||| | Sbjct 141657 GCCAAATTGCACACCGCTATTTCATCCTTCGACGAGTACTCCACTATCTCGGTACACAGA 141716 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || |||| ||| |||||||| | ||||| ||||| ||| ||| |||||||||||| Sbjct 141717 TTGGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTTG 141776 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCG 116619 || ||||| || || ||||| ||| || || | || || || ||||| || Sbjct 141777 TACAGCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGTCC 141836 Query 116620 GCGGCTGGCACAGTGGCGT-TGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTC 116678 || ||| |||||| | ||| ||||||| ||||||| ||||| || ||| Sbjct 141837 TGTGCCTTCAC-CTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTCTC 141895 Query 116679 AAACTCTTCACCC 116691 |||||||| ||| Sbjct 141896 GAACTCTTCGCCC 141908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613327971540360