Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq24 89.7 6e-13
seq7 89.7 6e-13
>seq24
Length=2206587
Score = 89.7 bits (98), Expect = 6e-13
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149
|| ||| | |||||| |||| | || || | | ||||| || || ||||| | ||
Sbjct 1947815 CTGTTTAATGCCATCGAAACGCTACCGTGCGTGAAGAAGAAGGCAGACTGGGCGCTTAAC 1947756
Query 102150 TGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAG 102209
||| | | ||| | | ||||| ||||| | |||||||||| || |||
Sbjct 1947755 TGGATCTCGAGCAAGAAGGCTAACTTTGGCGAGCGTGTGGTCGCATTTGCTGCCGTCGAG 1947696
Query 102210 GGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268
|||||||||||| || ||| |||| | || | |||||||||||||| || || ||
Sbjct 1947695 GGTATCTTCTTCAGCGGCAGCTT-TGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTTAT 1947637
Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGA 102314
||| ||||| |||||| |||||||| || || | |||||||||
Sbjct 1947636 GCCGGGTCTTACCTTCTCGAACGAGCTGATTTCGAGGGACGAGGGA 1947591
>seq7
Length=4015228
Score = 89.7 bits (98), Expect = 6e-13
Identities = 147/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 175994 GTAAAGATATACCTCGTT-TGAGACGCATCCTTACCACCCATGAGACGCGTACCAAACTG 176052
|| ||||| ||||||| || || |||||| || || | || ||||||||||||||
Sbjct 169039 GTGAAGATGTACCTCGGGCTGGCACT-ATCCTTTCCGCCGGTCAGGCGCGTACCAAACTG 169097
Query 176053 ACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGAC 176112
|| | ||| | || || ||||| ||||| || | ||| | | ||||| ||||
Sbjct 169098 GCCGCCCGGATACAGCAGGTTGATGTTGTTGCTGCCGACGTAATTCTGCGCCAGGTTGAT 169157
Query 176113 AATCGTGTCCGCGAGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACAAAT 176170
|| ||| || |||| |||| ||||||||||||||||| ||| ||||| || ||
Sbjct 169158 GATGGTG-GAGC-AGAGCGACTGCTCACCGTGGTGGTACGCCGACTTTTCTGCCACCGAT 169215
Query 176171 GCCGCCAACTGCGCCACTTTCATCTC 176196
| |||| ||| ||||| |||| |||
Sbjct 169216 CCAGCCAGCTGGGCCACCTTCACCTC 169241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620561057867120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |