Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq59 114 2e-20
seq72 104 3e-17
>seq59
Length=1145648
Score = 114 bits (126), Expect = 2e-20
Identities = 304/461 (66%), Gaps = 9/461 (2%)
Strand=Plus/Plus
Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228
||||| ||||||||||| |||| | | ||| || || ||||| || || | |||
Sbjct 141357 GCCAACTCACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTC 141416
Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288
| || | ||| || || || | | ||||| |||||| || |||| || |
Sbjct 141417 AGCTTTTGGGCCTCCTCGCTTTCGTACGGATAGCGCATCAAAATGAACGCATCGGCCATG 141476
Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA--- 106345
|| |||||||| | ||| || || ||||| ||||| || || ||| | |||
Sbjct 141477 CCCTGAACACCGATACCGATCGGCCTGTGCCGCATGTTGGAG---CGCTTCGCCTCCGGT 141533
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405
|| ||||| | ||| | || || | | ||| ||||| || | |||||| | ||
Sbjct 141534 ACTGGATAGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCGCGACA 141593
Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465
|| | || || || | || | || ||| | || ||| || | || |||
Sbjct 141594 TCCTTCAGCTTGGCAAAGTCGTACGTTTT-GTCCGGT--TTCACAAACATGTTCAGCGCG 141650
Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525
|| || ||||||||||| || || | |||||||| | |||||| | || || |||
Sbjct 141651 ATCGAGGCCAAATTGCACACCGCTATTTCATCCTTCGACGAGTACTCCACTATCTCGGTA 141710
Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585
|||| ||||||| ||| || || || | |||| || || ||||| ||||||||||
Sbjct 141711 CACAGATTGGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCA 141770
Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
|||||||| |||||||| || ||||| ||| ||| ||
Sbjct 141771 TCCTTGTACAGCATGTACGGAACGCCCGTTTCCACCTGCGA 141811
>seq72
Length=881775
Score = 104 bits (114), Expect = 3e-17
Identities = 240/357 (67%), Gaps = 6/357 (2%)
Strand=Plus/Minus
Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958
|||| |||| ||||| || |||| || ||| || ||||| || | || || ||
Sbjct 354536 CCGCTTCTACCAAGCGTCCACCTCGGAACTGTACGGCAAGGTGGCTGAAACGCCGCAGAA 354477
Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATT 7017
||| ||||||| |||||||||||||| |||| ||||| | | ||| | |
Sbjct 354476 CGAAAAGACACCGTTCTACCCACGCTCACCGTACGCCTGTGCAAAGATGTACGG-TTACT 354418
Query 7018 GGCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCA 7077
|| | || | ||| || ||||| | ||| |||| || ||| ||| ||||| ||||
Sbjct 354417 GGATTGTGATAAACTATCGCGAAGCGTACAACATGTTCGCCTGCAACGGGATCCTTTTCA 354358
Query 7078 ACCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTACC--GAGGGTAT 7135
|||| ||||||||| | ||||| | | |||| || ||| ||||| ||| |||
Sbjct 354357 ACCACGAATCACCGCGCCGAGGAGAAAACTTCGTTACACGCAAGATCACCCGTTCGGTTG 354298
Query 7136 CAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAG 7195
| || | || | || | | |||| | | || ||||||| | || || || |
Sbjct 354297 CGAAGATTTC--GCTCGGACAGCAAGAGTACCTGGAGCTGGGTAATCTGGACTCGAAGCG 354240
Query 7196 AGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGA 7252
|| ||||| ||||| || ||||| || ||||| |||||||| ||| | || || ||
Sbjct 354239 TGACTGGGGCCACGCCAAAGACTACGTGGAAGCGATGTGGCTGATGATGCAGCAGGA 354183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589808444484040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |