Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq31 93.3 3e-13 >seq31 Length=1955281 Score = 93.3 bits (102), Expect = 3e-13 Identities = 177/258 (69%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || || || || || ||||| || || | || | || || || ||| Sbjct 2578 GGCATTGATCTCGGCACGACCTACAGCTGTGTCGGCGTGTTCCAGCACGGCAAGGTAGAA 2519 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||||||||| || || ||| |||| || ||||| ||||| | ||||| || || Sbjct 2518 ATCATTGCCAATGACCAGGGCAACCGAACCACGCCATCGTATGTGGCCTTCACTGACACG 2459 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATACT 550174 || | | | |||| ||||| || || | || ||| | || || || ||||| || Sbjct 2458 GAGCGTCTGATTGGCGATGCTGCCAAGAACCAGGTAGCGA-TG--AACCCGACCAACACC 2402 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 || || || || || ||| | ||||| | | || | ||| | | | ||||| || Sbjct 2401 ATCTTCGACGCGAAGCGTCTGATTGGCCGCAAGTTCGACGATCCCGCCATCCAGGCCGAC 2342 Query 550235 ATGAAGCATTGGCCTTTC 550252 |||||||| ||||| ||| Sbjct 2341 ATGAAGCACTGGCCGTTC 2324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028060036116790