Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq59 199 7e-46
seq24 131 3e-25
seq92 109 1e-18
>seq59
Length=1145648
Score = 199 bits (220), Expect = 7e-46
Identities = 754/1159 (65%), Gaps = 68/1159 (6%)
Strand=Plus/Plus
Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959
||| || |||| || | ||| || || || || || || | || | ||||| ||| ||
Sbjct 141074 CAGATGGTGGTTCACCACCTGAAACTCGCCGGAAAGTACACGCCGATTGTAAACGTTGGA 141133
Query 212960 AGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCAT 213019
||||| || |||| | ||||||||| |||| || ||||| || || || |||||
Sbjct 141134 CGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCGAAGCGGTAGGCAT 141193
Query 213020 GGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGC 213079
|| |||| ||| || || | | ||||||| | || | | ||| ||
Sbjct 141194 CGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGCAATTTTTTCCTTCAACTCGGC 141253
Query 213080 CCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGAT 213139
||| | ||| | ||| ||| |||||| |||||||| || |||||| |||
Sbjct 141254 CCAATTCCAAAGATCCGAC-GGT-----TCCTTC---TTCCACATTTCGTACTGCAGGAT 141304
Query 213140 GCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTC 213199
||||||||| || || || || | ||| | ||| || || | ||||| |||
Sbjct 141305 GCCTTTGCTTACCGGACTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCAACTC 141364
Query 213200 GCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTT 213259
||| ||| | || || |||||||||| ||||| || || | ||| ||||| |
Sbjct 141365 ACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAGCTTTTG 141424
Query 213260 GGCCTC------TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCC 213313
|||||| | | ||| || |||||| ||| ||| |||| |||| ||
Sbjct 141425 GGCCTCCTCGCTTTCGTACGGATAGCGCATCAAAATG------AACGCATCGGCCATGCC 141478
Query 213314 CTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACT---CCTCC-- 213368
||| || ||||| ||||| || ||||| | || ||| ||||| || |||||
Sbjct 141479 CTGAACACCGATACCGATCGGCCTGTGCCGCATGTT------GGAGCGCTTCGCCTCCGG 141532
Query 213369 -AAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGAC 213427
| || || |||| ||||| || ||||| || ||||| || | || | |||
Sbjct 141533 TACTGGATAGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCGCGAC 141592
Query 213428 ATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG---CACAAACTCAGGCAG 213484
|| ||| || | | || |||| |||| | ||||||| |||
Sbjct 141593 ATCCTTCAG---CTTGGCA---AAGTCGTACGTTTTGTCCGGTTTCACAAACATGTTCAG 141646
Query 213485 GGCGATGCTGGCCAGGTTGCAAACGGCCA---CCTCCTGAGAGTCTGTGTACTCCATGAT 213541
||||| ||||| ||||| || || | | |||| || | |||||||| ||
Sbjct 141647 CGCGATCGAGGCCAAATTGCACACCGCTATTTCATCCTTCGAC---GAGTACTCCACTAT 141703
Query 213542 CTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTT 213601
|||||| ||||| ||| || |||||||| | |||||| || || ||| ||| |
Sbjct 141704 CTCGGTACACAGATTGGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTT-GCGGT 141762
Query 213602 GGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCT 213660
||| | ||||||||| |||||||| || || || || | ||| || | | ||
Sbjct 141763 TGCACGCATCCTTGTACAGCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGAT-- 141820
Query 213661 GGCT--CCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGT 213717
||| ||| |||| |||| ||||| ||| || | | | | | | | |||||
Sbjct 141821 GGCAAACCATAGGT-CCTGTGCCTTCACCTGGCGTATAA-ATCGACCCTCCTG--CTCGT 141876
Query 213718 ACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTCCCGGACAGGA- 213775
|| ||| |||| | ||| || | |||||| | | | ||| ||| || |||
Sbjct 141877 ACCCAGTGTACAGCTTCTCGAACTCTTCGCCCCAAGTGTCAG-CCAATCCGGGGCAGTCG 141935
Query 213776 TGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCG 213834
|| ||| ||||| |||||||| ||| | ||| || | |||||||||||| ||||
Sbjct 141936 TGTGGG-CACATCAGGCTCCACATTTCGTTCGCCTCC-ACACGCTGCATGAACAGATCCG 141993
Query 213835 GGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGC 213894
||| |||||| ||| ||||| ||| | || | | ||| ||| || | ||||||
Sbjct 141994 GGATCCACAGGGCGTAGAACATGTCGCGGGCACGCACCTCCTCCTTGCCGGTGTTTTTCT 142053
Query 213895 GCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGC 213954
|||||| ||||| || || || ||| ||||||| || || | |||||||||||||||||
Sbjct 142054 TCAGATCCAGAAACTCGAATATATCCCCGTGCCATGGTTCGAGGTAGATGGCAAAGGCGC 142113
Query 213955 CCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGA 214011
| |||| | ||||| ||||| ||||| || |||| ||||| | | |||||| |
Sbjct 142114 CGGGCCGCTTGTTGCCACCCTGATCCACGTACCGGGCCGTGTTGTTGTAAACGCGCAGCA 142173
Query 214012 CGGGTACCAGCCCGTTGGA 214030
|| |||| |||||| ||
Sbjct 142174 TCGGCACCAACCCGTTCGA 142192
>seq24
Length=2206587
Score = 131 bits (144), Expect = 3e-25
Identities = 173/240 (72%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 48127 CATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCA 48186
|| |||||| || || | ||||| || ||||||| || ||| |||| ||||||
Sbjct 1947567 CAGGCAGGCGAAATCACAATGCAATCCCTCGTCCCTCGAAATCAGCTCGTTCGAGAAGGT 1947626
Query 48187 GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAA 48246
||||| ||||| | || | || ||||||||||| || | ||| || ||| |||
Sbjct 1947627 AAGACCCGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGCTGCCGCTGAA 1947686
Query 48247 GAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTC 48306
|||||| ||||| || || || || ||| | | ||| || || ||| ||||||
Sbjct 1947687 GAAGATACCCTCGACGGCAGCAAATGCGACCACACGCTCGCCAAAGTTAGCCTTCTTGCT 1947746
Query 48307 TGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366
||||||||| |||||||||||||||||||||||| | ||| || | ||| || |||||
Sbjct 1947747 CGAGATCCAGTTAAGCGCCCAGTCTGCCTTCTTCTTCACGCACGGTAGCGTTTCGATGGC 1947806
Score = 102 bits (112), Expect = 2e-16
Identities = 163/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
|||||||||| ||| || ||||| || || |||||||| ||||||||| | |||||
Sbjct 1947949 GTACATCTCACTGTGGACGTTCTCCATCGCAATCTGGAAGCCGTAGAAGCAGCGCGCCTC 1948008
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
|||||||| || | ||| | || | ||||||||| || || || || || ||
Sbjct 1948009 CGTTACCTGCACCTCCTGGCTGAACCGTTCGACCAGATTCTCGTTCACGATACCGTCGGA 1948068
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
|| ||||||||||| || || || | ||||| || ||| | | | || | |
Sbjct 1948069 CGCGGCAAAGAAGGCCAGCACGTGCGAGATAAAATGACGTTCGCTCGGTTTTAGCGAGTC 1948128
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
|||| ||| | ||| || ||||| || |||||||| |||||||| || ||
Sbjct 1948129 CCAGTCCTTCATGTCCTTCGATAGGTCTACCTCTTCCACGGTCCAGAACGATGC 1948182
>seq92
Length=619269
Score = 109 bits (120), Expect = 1e-18
Identities = 95/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 241507 CTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCG 241566
|||||||||| || |||||||||||| || ||||||||||| |||| ||| |||| ||
Sbjct 539501 CTCCTCCAGCTTCGAGATGCGTTCCAGCTTCCGCCGGCGGCACTTGGAGGCGGCCACCCG 539442
Query 241567 GTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624
|||||| | | ||| |||||| ||||||||| ||||| ||||| |||||||||
Sbjct 539441 GTTCCGCAACCGCTTCCGTTCCAGCTTGATGCGCTCCTGCGATTCCATATCGATCGGA 539384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931260664336640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |