Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq72 132 6e-26 >seq72 Length=881775 Score = 132 bits (146), Expect = 6e-26 Identities = 277/410 (68%), Gaps = 2/410 (0%) Strand=Plus/Plus Query 177557 TTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCT 177616 |||| ||||||| | ||| ||||| || ||||| || || | ||| | || || | | Sbjct 354121 TTTCGACAAACTCTCGCACCGAGTGCGTTTCCCCGGTAGCAATGACAAAATCTTCCGGCC 354180 Query 177617 CTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTC 177676 ||| || || | ||| |||||||| ||||| || ||||| ||||| || |||||||| | Sbjct 354181 GTTCCTGCTGCATCATCAGCCACATCGCTTCCACGTAGTCTTTGGCGTGGCCCCAGTCAC 354240 Query 177677 TGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGA 177736 | || || ||||| || || ||| ||||| || || | ||| | | Sbjct 354241 GCTTCGAGTCCAGATTACCCAGCTCCAGGTACTCTTGCTGTCCGAGCGAAATCTTCGCAA 354300 Query 177737 CGCCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGA 177796 | | || ||||| ||| || |||| | ||||| | ||||||||||||||||| Sbjct 354301 CCGAACGGGTGATCTTGCGTGTAACGAAGTTTTCTCCTCGGCGCGGTGATTCGTGGTTGA 354360 Query 177797 AGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGT 177856 | ||||| ||| |||||| |||| || | ||| || || ||| | || | ||||| Sbjct 354361 AAAGGATCCCGTTGCAGGCGAACATGTTGTACGCTTCGCGATAGTTTATCACAATCCAGT 354420 Query 177857 GAGCGGCCA-ATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTT 177915 | || || |||| | | | | || || ||||||||||| ||||||| || | Sbjct 354421 AACCGTACATCTTTGCACA-GGCGTACGGTGAGCGTGGGTAGAACGGTGTCTTTTCGTTC 354479 Query 177916 TGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || ||||| || || || ||| ||||| || || |||||||| Sbjct 354480 TGCGGCGTTTCAGCCACCTTGCCGTACAGTTCCGAGGTGGACGCTTGGTA 354529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596395319648480