Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq72 132 6e-26
>seq72
Length=881775
Score = 132 bits (146), Expect = 6e-26
Identities = 277/410 (68%), Gaps = 2/410 (0%)
Strand=Plus/Plus
Query 177557 TTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCT 177616
|||| ||||||| | ||| ||||| || ||||| || || | ||| | || || | |
Sbjct 354121 TTTCGACAAACTCTCGCACCGAGTGCGTTTCCCCGGTAGCAATGACAAAATCTTCCGGCC 354180
Query 177617 CTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTC 177676
||| || || | ||| |||||||| ||||| || ||||| ||||| || |||||||| |
Sbjct 354181 GTTCCTGCTGCATCATCAGCCACATCGCTTCCACGTAGTCTTTGGCGTGGCCCCAGTCAC 354240
Query 177677 TGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGA 177736
| || || ||||| || || ||| ||||| || || | ||| | |
Sbjct 354241 GCTTCGAGTCCAGATTACCCAGCTCCAGGTACTCTTGCTGTCCGAGCGAAATCTTCGCAA 354300
Query 177737 CGCCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGA 177796
| | || ||||| ||| || |||| | ||||| | |||||||||||||||||
Sbjct 354301 CCGAACGGGTGATCTTGCGTGTAACGAAGTTTTCTCCTCGGCGCGGTGATTCGTGGTTGA 354360
Query 177797 AGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGT 177856
| ||||| ||| |||||| |||| || | ||| || || ||| | || | |||||
Sbjct 354361 AAAGGATCCCGTTGCAGGCGAACATGTTGTACGCTTCGCGATAGTTTATCACAATCCAGT 354420
Query 177857 GAGCGGCCA-ATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTT 177915
| || || |||| | | | | || || ||||||||||| ||||||| || |
Sbjct 354421 AACCGTACATCTTTGCACA-GGCGTACGGTGAGCGTGGGTAGAACGGTGTCTTTTCGTTC 354479
Query 177916 TGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
|| || ||||| || || || ||| ||||| || || ||||||||
Sbjct 354480 TGCGGCGTTTCAGCCACCTTGCCGTACAGTTCCGAGGTGGACGCTTGGTA 354529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596395319648480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |