Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6 141 3e-28 >seq6 Length=4219845 Score = 141 bits (156), Expect = 3e-28 Identities = 180/245 (73%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| | ||||||||| || ||||| ||| | ||||| ||||| ||| Sbjct 160357 TCCATAGCCTTGATCAGACGACGCTGGATGTAACCGGTTTCCGCCGTTTTGACAGCGGTA 160298 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 || || ||||| ||||||||||||| || |||||| | | ||| |||| || || Sbjct 160297 TCGATCAGACCTTCACGACCACCCATGGCGTGGAAGTAGAACTCGGTCGGTGTCAGTCCG 160238 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTA 302751 ||| | ||| | || ||||||||||||| |||||| || ||||||| ||| | Sbjct 160237 GCAAGGTACGAGTTTTCTACGAAACCACGCGACTCGGGACCGTAATCGTC---CTTAATG 160181 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| |||| ||| | || ||||| | || |||||||| || || ||||||||| Sbjct 160180 AAGTGGGGCAAGGTGCGTTTACGGAAGCCGAACGGAATACGCTTACCCTCCACGTTCTGC 160121 Query 302812 TGTCC 302816 ||||| Sbjct 160120 TGTCC 160116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471376877558027