Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq59 419 2e-112
seq20 136 4e-27
seq57 131 2e-25
seq1 127 2e-24
seq6 125 6e-24
>seq59
Length=1145648
Score = 419 bits (464), Expect = 2e-112
Identities = 1175/1785 (66%), Gaps = 39/1785 (2%)
Strand=Plus/Plus
Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212
||| || || ||||||| || |||| |||| ||||| |||| |||||| ||||| ||
Sbjct 140735 TTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGTTTTGTTCGCAGATAGTACATGCC 140794
Query 138213 CGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271
|||||| | |||||||||| || |||| | ||| ||||| || || | || |||
Sbjct 140795 CGTTTTCAGTCCCATTTTCC-AGCCGTAAAAGTGGATCGATGTCAGCTTGCCATAGTTCG 140853
Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331
||| |||| |||||| |||||||| ||||||||| || || || || ||| |
Sbjct 140854 GTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCGATAAACGCACCCCGGTCAGCAG 140913
Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391
|||| ||||| | ||||| ||||||||||| || ||||| ||||| || || |
Sbjct 140914 CCATCTTAATGCACGTTTTAACCGAAATCTCCCACACCGTTTTGTACAGATCGCGTATTT 140973
Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451
|||||| | | | || ||||||| |||||| | | || | || |||
Sbjct 140974 CCTTCGGTATCGATTCGATGCTTTGAATCGATCCGTTGTTGGACAGAATTTGGTTCTTCA 141033
Query 138452 TGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCT 138511
|||| | ||||| || | |||| || | | ||||| ||| | ||||
Sbjct 141034 TGTCTAGATCCCACAGACCCATCGCTGTCAAATCTTGCAGCAGATGGTGGTTCACCACCT 141093
Query 138512 GAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATT 138571
|||| || |||| | ||| || ||| ||||| |||| ||| | || || || || |
Sbjct 141094 GAAACTCGCCGGAAAGTACACGCCGATTGTAAACGTTGGACGTGTACGGTTCGAAGGACT 141153
Query 138572 CGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAAT 138631
||||||| |||| || || ||||| | ||||| ||||| |||| || || ||||
Sbjct 141154 CGTTGTTACCCAAGATTTGTGCCGTCGAAGCGGTAGGCATCGGTGCCAACAGCAGCGAAT 141213
Query 138632 TCCGTAAACCGTGAAGCTTG--ATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCT 138689
| || | ||||| ||| ||| |||||| | | | ||| | ||| | |||
Sbjct 141214 TGCGGATGCCGTG--CTTTGCAATTTTTTCCTTCAACTCGGCCCAATTCCAAAGATCCGA 141271
Query 138690 AGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTA 138749
|||| || |||||||| |||||||| | || || ||| | ||||| ||||||||
Sbjct 141272 CGGTTCCTTCTTCCACATTTCGTACTGCAGGATGCCTTTGCTTACCGGACTCCCTTCGTA 141331
Query 138750 CGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCGCACCATAGT 138808
|| ||||| || | | || |||||||| |||||| || | || || ||||
Sbjct 141332 CGTTTCGTACGGTCC-GTCGCGGGCGGCCAACTCACAGCTCGCTTCCAATGCTCCGTAGT 141390
Query 138809 AAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGC 138868
| || |||||| ||| || || || ||| | ||||||| |||| |||||||| ||
Sbjct 141391 AGATTGTTTCGAAAATTTGTTGGTTCAGCTTTTGGGCCTCCTCGCTTTCGTACGGATAGC 141450
Query 138869 GGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCA 138928
| | || ||||||| ||||||| || || || || | |||| || | || ||||
Sbjct 141451 GCATCAAAATGAACGCATCGGCCATGCCCTGAACACCGATACCGATCGGCCTGTGCCGCA 141510
Query 138929 GATTTGA-CGCTTTTGCGGCTTCGATA--GGATAATAGTTTACATCGATGATTTTGTTTA 138985
|| || ||||| || || || || ||||| ||||||| |||||| |||||||| |
Sbjct 141511 TGTTGGAGCGCTT---CGCCTCCGGTACTGGATAGTAGTTTATATCGATAATTTTGTTCA 141567
Query 138986 AATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGT 139045
||| ||| | | ||| | || ||| | |||| ||||| || |
Sbjct 141568 GATTGCGCGTCAAAATCTTCGCGACATCCTTCAGCTTGGCAAAGTCGTACGT------TT 141621
Query 139046 TGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCA 139105
|||| || || ||||| |||| | |||||||| | ||||||||||| |
Sbjct 141622 TGTC-----CGGTTTC-ACAAACATGTTCAGCGCGATCGAGGCCAAATTGCACACCGCTA 141675
Query 139106 CTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTA 139164
||| | | | || ||| || || || |||| ||||| ||| |||||| || ||
Sbjct 141676 TTTCATCCTTCGACG-AGTACTCCACTATCTCGGTACACAGATTGGAACACTTTATGGTG 141734
Query 139165 CCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTG 139224
|| | || || |||||||| || ||||| || ||||| ||||| ||||| ||||| |
Sbjct 141735 CCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTTGTACAGCATGTACGGAACG 141794
Query 139225 CCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGC 139284
|| |||||||| || | || || ||| | | |||| || | | || ||
Sbjct 141795 CCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGTCCTGTGCCTTCACCTGGCGT 141854
Query 139285 ACGTAAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGG 139342
| |||| | | || |||||||| ||| || | ||||| ||| || | |
Sbjct 141855 A--TAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTCTCGAACTCTTCGCCCCAAG 141912
Query 139343 CGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGA 139402
||||| | || | || | || || ||||| || ||| | ||||||||| |
Sbjct 141913 TGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCTCCACATTTCGTTCGCCTCCA 141972
Query 139403 CGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTAT 139462
| ||| ||||||||||||||| ||||||| ||| | | || ||||| || | |
Sbjct 141973 CACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAACATGTCGCGGGCACGCACCT 142032
Query 139463 CTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTT 139522
| ||| || |||| |||| | || || || || | || ||||||||||||
Sbjct 142033 CCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAATATATCCCCGTGCCATGGTT 142092
Query 139523 CCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAG 139579
| || |||||||| | ||||| ||| |||||||| ||||| |||| || | |
Sbjct 142093 CGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGCCACCCTGATCCACGTACCGGGCCG 142152
Query 139580 CATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGA 139639
|| ||| | ||||||| ||||||| ||| ||| ||| | || || |||| ||||
Sbjct 142153 TGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGTTCGAAATCCCATTCGTGC--CGGA 142210
Query 139640 TGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTT 139697
| ||| | || || | | || || || | ||||| |||||| | ||||
Sbjct 142211 GATGTACGTTCCTTTGGCGCGAATGCAGTGCACGTTCAGCCCGATACCGCCGGCCGATTT 142270
Query 139698 GGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCAT 139757
||| || | | || | || || ||||| ||||| || ||||||||| |||
Sbjct 142271 GGAAATCAGTGCACACTGCTTTAGCGTATCGTAAATACCCTCAATACTGTCGTCCGACAT 142330
Query 139758 CGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGG 139817
|| | ||||||||| |||||||| ||||| | | ||| |||| ||||||| || ||
Sbjct 142331 GGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGCTGCGTAGCGGCCGCAAACATGGTCGG 142390
Query 139818 ACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAAT 139877
|| || || || | | || | || | |||||| |||||||| ||||
Sbjct 142391 TGAGGCATGGGTAAAGTAGCGCTCGGAAAGCAGATTGTACGTCTCGATGGCAGCATCAAT 142450
Query 139878 ATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922
|| ||||| ||||||| | || ||||||||||| |||||
Sbjct 142451 GTCTTCACCGTGAATACCGATGGCAACGCGCATCAGCATGTGTTG 142495
>seq20
Length=2346360
Score = 136 bits (150), Expect = 4e-27
Identities = 174/237 (73%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 24695 ATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTA 24754
||| | | |||||||||||| | || ||||| || || || || || ||||| || ||
Sbjct 834981 ATTTACAGGATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTC 834922
Query 24755 GAAGCCACCG-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACC 24813
|| |||| || |||| | || | || || |||||||| ||||| || || || ||
Sbjct 834921 GA-GCCATCGGACACGATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCC 834863
Query 24814 TCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTC 24873
||| ||||| || ||||||||||| ||||| || |||||||||||| | | ||||
Sbjct 834862 TCCAGATCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGATGGTCGTACTCTGTC 834803
Query 24874 AGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || ||||| ||||| || |||||||| | || |||| |||||
Sbjct 834802 CGACTACAACATCCAGAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTGCGTGGAGG 834746
Score = 131 bits (144), Expect = 2e-25
Identities = 178/246 (72%), Gaps = 3/246 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| || || || || || ||||| || || || | |
Sbjct 834516 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCG 834457
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || ||||| |||||
Sbjct 834456 GACACGATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAG 834397
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||||||||| ||||| || ||||||||||| | | |||| || || |||
Sbjct 834396 CAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGTCGTACTCTGTCCGACTACAAC 834337
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAG-CC 24942
|| || ||||| ||||| || |||||||| | ||| | |||| || | ||||||| |
Sbjct 834336 ATCCAGAAGGAGTCGACCCTGCACTTGGTTCTTCGACTTCGCG--GGGGAAACTGAGTCG 834279
Query 24943 AACGAA 24948
||||||
Sbjct 834278 AACGAA 834273
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| || || || || || ||||| || || || | |
Sbjct 834744 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCG 834685
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || ||||| |||||
Sbjct 834684 GACACGATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAG 834625
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||||||||| ||||| || ||||||||||| | | |||| || || |||
Sbjct 834624 CAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAAC 834565
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || |||||||| | || |||| |||||
Sbjct 834564 ATCCAGAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTGCGTGGAGG 834518
>seq57
Length=1190389
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || ||||| || || || || || || || || | |
Sbjct 631524 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 631465
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || |||||||| ||||| |||||
Sbjct 631464 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCAGATCAG 631405
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| ||||| || |||||||||||| | | | |||| || || |||
Sbjct 631404 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGTCGGACTACAAC 631345
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| |||||||| || || || ||||| ||||| | ||||| ||
Sbjct 631344 ATTCAGAAGGAATCTACCCTTCATCTGGTGCTGCGACTCCGCGGTGG 631298
>seq1
Length=5975090
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762
||||||||||| | || || || ||||| || || || || ||||| || | ||||| |
Sbjct 5042934 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTCGAGGTTG-AGCCATC 5042992
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || ||||| || ||||| || ||||| || || |||||
Sbjct 5042993 CGACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCGCCAGATCA 5043052
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| ||||||||||||| || |||||||| ||| | | | |||| || |||||
Sbjct 5043053 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAA 5043112
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| || |||||||| || || || |||| | || |||| || |||
Sbjct 5043113 CATCCAGAAGGAATCCACCCTCCATCTGGTCCTTCGTCTGCGTGGTGGC 5043161
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762
||||||||||| | || || || ||||| || || || || ||||| || | ||||| |
Sbjct 5043162 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTCGAGGTTG-AGCCATC 5043220
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || ||||| || ||||| || ||||| || || |||||
Sbjct 5043221 CGACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCGCCAGATCA 5043280
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| |||||||||| || || |||||||| ||| | | | |||| || |||||
Sbjct 5043281 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAA 5043340
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || |||||||| || || || |||| | || |||| || ||
Sbjct 5043341 CATCCAGAAGGAATCCACCCTCCATCTGGTCCTTCGTCTGCGTGGTGG 5043388
>seq6
Length=4219845
Score = 125 bits (138), Expect = 6e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| || || ||||| || ||||| || || || || ||||
Sbjct 2101146 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGA-GCCAT 2101088
Query 24763 CG-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|| | || | || | || || |||||||| ||||| || || || || || ||||
Sbjct 2101087 CGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGATC 2101028
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| ||||||| ||||| || ||||||||||| | | | |||| || || |
Sbjct 2101027 AGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACA 2100968
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
|||| || ||||| ||||| || || ||||| | || ||||||| ||||
Sbjct 2100967 ACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGCGGTGGCG 2100917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449766168039880
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