Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq44 136 3e-27 >seq44 Length=1453912 Score = 136 bits (150), Expect = 3e-27 Identities = 173/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| || ||||| | ||||| ||||| | ||| || | | |||| |||||| | Sbjct 804475 CGGTGGATTTTTGATGATGAACGTGTTCACCTTGTGGTTCACCTCGAGCGGACCGTGAAA 804416 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 |||||| || ||||||||||| |||| | ||| || | || || || || || || Sbjct 804415 ACCGCACGCCTTGCAGCCCTGCGAGATCGTACCCTTCTTGGACGATACAATCAGATCCGT 804356 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 |||||||||||| || ||||| |||| || |||||||||||||| || || ||||| || Sbjct 804355 CTCCGGGTTGTCGCACTCCGGGCACAGGACGAACTTGCGGATGAAGCCGTCGAGCAGATC 804296 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||| | ||| || ||||| || || || || ||||| || ||||| | | ||||| Sbjct 804295 CTGCAGCTTGGTGGCATCGTGCGATCCATTCACAATGAAACGCTCGTTCTAGAAATCG 804238 Score = 134 bits (148), Expect = 1e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 ||||| || ||||| || || |||||||| ||||| ||||| |||||||| | || || Sbjct 804040 ATCGAATTGAGTTTGGGCTCCTAGCTCGCAACCGAAATACTTCGTCGGGTAGGTTGCAGG 803981 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 ||| || | ||| || | || | |||||| ||||| || || || ||||||||||| Sbjct 803980 ACGACCGATCGCTCGCGCCACCTCCGCCATGTTCACGATTACCGTTTTAATGCCGTTGCC 803921 Query 34557 CTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCAC 34616 || || || ||||| || |||||| ||||| ||||| |||||||| || | ||| Sbjct 803920 TTTACCCTCTACCTTCGCATTGATGCGAGGCATCTTGTACCGGTAGAAGATATCGGTCAC 803861 Query 34617 ATTGCGGTTAACGTTCACAGTCCCCAT 34643 |||||| || ||||| || || |||| Sbjct 803860 ATTGCGATTCACGTTGACGGTAGCCAT 803834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412724008649903