Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq6 141 6e-29
seq1 140 2e-28
seq57 127 1e-24
seq20 122 6e-23
>seq6
Length=4219845
Score = 141 bits (156), Expect = 6e-29
Identities = 163/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| |||| ||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 2100934 AGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCC 2100993
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||| || ||||| || |||| | |||||||||||
Sbjct 2100994 TCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCC 2101053
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCG-ATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || | ||| |||||| |||| || |||
Sbjct 2101054 TGGATCTTCGCCTTCAC--ATTCTCGATCGTATCCGATGG-CTCGACCTCAAGAGTAATG 2101110
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||||||||| || || |||||||||||
Sbjct 2101111 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 2101145
>seq1
Length=5975090
Score = 140 bits (154), Expect = 2e-28
Identities = 161/215 (75%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||| || | |||| |||||||| |||||||||||||| ||| |||| ||||
Sbjct 5043145 AGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCT 5043086
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||| |||||||| || ||||| ||| |||| | |||||||||||
Sbjct 5043085 TCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5043026
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | || | ||| || || | ||| ||||
Sbjct 5043025 TGAATCTTGGCCTTCAC--ATTCTCGATGGTGTCGGATGGCTCAACCTCGAGGGTGATGG 5042968
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||||| || || ||||| || ||||||||||||
Sbjct 5042967 TCTTTCCGGTCAGAGTCTTGACGAAGATCTGCATG 5042933
Score = 134 bits (148), Expect = 9e-27
Identities = 160/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||| || | |||| |||||||| |||||||||||||| ||| |||| ||||
Sbjct 5043373 AGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCT 5043314
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || |||||||| || ||||| ||| |||| | |||||||||||
Sbjct 5043313 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5043254
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | || | ||| || || | ||| ||||
Sbjct 5043253 TGAATCTTGGCCTTCAC--ATTCTCGATGGTGTCGGATGGCTCAACCTCGAGGGTGATGG 5043196
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||||| || || ||||| || ||||||||||||
Sbjct 5043195 TCTTTCCGGTCAGAGTCTTGACGAAGATCTGCATG 5043161
Score = 131 bits (144), Expect = 1e-25
Identities = 159/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||| || | |||| |||||||| |||||||||||||| ||| |||| ||||
Sbjct 5042917 AGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCT 5042858
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || |||||||| || ||||| ||| |||| | |||||||||||
Sbjct 5042857 TCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5042798
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | || | ||| || |||| ||| || |
Sbjct 5042797 TGAATCTTGGCCTTCAC--ATTCTCGATGGTGTCGGATGGCTCAACCTCAAGGGTGATAG 5042740
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||||| || || ||||| || ||||| ||||||
Sbjct 5042739 TCTTTCCGGTCAGAGTCTTGACGAAGATTTGCATG 5042705
>seq57
Length=1190389
Score = 127 bits (140), Expect = 1e-24
Identities = 160/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| ||||| |||| ||| |||||||||||||| |||||||| ||| |||| ||||
Sbjct 631312 CAGCACCAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACCATC 631371
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| ||||||||||| || || ||||| ||| | || | || ||||| ||
Sbjct 631372 CTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCCTTATC 631431
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || | |||||| |||| || |||
Sbjct 631432 CTGGATCTTGGCCTTCAC--ATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 631489
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||||| || ||||| || || || || |||||||||||
Sbjct 631490 GTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGAT 631527
>seq20
Length=2346360
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || || | || ||||
Sbjct 834761 AGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 834820
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 834821 TCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 834880
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | |||||| || | || ||||||
Sbjct 834881 TGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAGCGTGATGGTC 834940
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || |||||||||||
Sbjct 834941 TTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 834972
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || || | || | ||
Sbjct 834533 AGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 834592
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 834593 TCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 834652
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | |||||| || | || ||||||
Sbjct 834653 TGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTC 834712
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || |||||||||||
Sbjct 834713 TTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 834744
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||||||||| ||||| ||||| || || | || | ||
Sbjct 834305 AGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCC 834364
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 834365 TCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 834424
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | |||||| || | || ||||||
Sbjct 834425 TGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTC 834484
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || |||||||||||
Sbjct 834485 TTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 834516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325600031596649
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |