Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq57 86.0 6e-12 seq59 84.2 2e-11 >seq57 Length=1190389 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||||| |||||||| || || |||||||| || || |||| Sbjct 631310 CGCAGCACCAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACCA 631369 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 || || || || || || || |||| ||||| |||||||| ||||| || ||||| || Sbjct 631370 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCCTTA 631429 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || || || || | | || | |||||| | || || || |||| || | Sbjct 631430 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 631489 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||||||||| | |||||| ||||| || ||||| Sbjct 631490 GTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 631524 >seq59 Length=1145648 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 150371 ACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTG 150430 || ||||| || || ||| | ||||| ||| || | |||||||||||| ||||| Sbjct 140742 ACCGTAAACTGGATCGCATTTACGGCCGGTTTTGTTCGCAGATAGTACATGCCCGTTTTC 140801 Query 150431 AGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAGTAGGGTTTG-C 150489 || || ||||| ||||| | ||| | ||| | || || | || ||| |||| | | Sbjct 140802 AGTCCCATTTTCCAGCCGTAAAAGTGGATCGATGTCAGCTT-GCCATAGTTCGGTTCGGC 140860 Query 150490 CATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTGCCATTTC 150549 || || | |||||||||||| ||||||||||| || |||| ||| || ||||| | Sbjct 140861 CACGTGTATGTTGAACGATTGCGACTGATCGATAAACGCACCCCGGTCAGCAGCCATCTT 140920 Query 150550 AAT 150552 ||| Sbjct 140921 AAT 140923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488401277977200