Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq68 105 1e-17
>seq68
Length=961948
Score = 105 bits (116), Expect = 1e-17
Identities = 211/310 (68%), Gaps = 2/310 (1%)
Strand=Plus/Minus
Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054
|| ||| ||| |||| || ||| ||| ||||| || | || | |||||| |||
Sbjct 663612 CTGGAAGCGGCCAAAACGCACGACGATCTGTGGAACGCGGCCCAGCTGCAGATGGTGAAG 663553
Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114
|| || || |||||| | ||| | || ||||| ||||| || |||||||| || |||||
Sbjct 663552 GAGGGCAAGATGCATGGCTTTCTGCGGATGTATTGGGCGAAGAAGATACTGGAGTGGACG 663493
Query 183115 AGAACTCCGGAAGATGCTTTGAGTTATAGT-ATCTATATGAACAATAAGTACGAACTAGA 183173
| ||| || || || || | | | | |||||| ||||| | |||| || ||
Sbjct 663492 AAAACGCCCGAGGAAGCGCTC-GAAACGGCCATCTATCTGAACGACCGGTACAGTCTGGA 663434
Query 183174 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAG 183233
|| ||||| ||||| ||||| || ||||||||||| || || ||||||||
Sbjct 663433 TGGGCGCGATCCGAACGGGTACGTCGGCTGTATGTGGTCGATCGCAGGCATACACGATCA 663374
Query 183234 AGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAA 183293
| ||||| || | | || ||||| ||||| | || ||||| |||||| | | ||
Sbjct 663373 GGGTTGGAAGGAGCGTGCGATTTTTGGCAAGATTCGGTACATGAACTATGAGGGATGCAA 663314
Query 183294 GAAGAAATTT 183303
| ||||||
Sbjct 663313 GCGCAAATTT 663304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903147279710560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |