Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq59 370 1e-97
>seq59
Length=1145648
Score = 370 bits (410), Expect = 1e-97
Identities = 1203/1847 (65%), Gaps = 42/1847 (2%)
Strand=Plus/Plus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|| |||||||| || ||||||||||| || |||||||| || | |||| ||||| ||
Sbjct 140766 GCCGGTTTTGTTCGCAGATAGTACATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAG 140825
Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514
|| || ||| || ||| ||| | || ||||| | || || || | ||||||
Sbjct 140826 TGGATCGATGTCAGCTTGCCATAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGAC 140885
Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGA---GGAATT 68571
|||||||| || || || | || || ||||| || ||| | | ||| | | |||
Sbjct 140886 TGATCGATAAACGCACCCCGGTCAGCAGCCATCTT---AATGCACGTTTTAACCGAAATC 140942
Query 68572 TCCCAAATAGTCTT--AAAAATCTGTTTGATATCATCTGGAA--GGCTCG-TATTTTGAA 68626
||||| | || || | | ||| | || || | || | | ||| | ||||||
Sbjct 140943 TCCCACACCGTTTTGTACAGATCGCGT--ATTTCCTTCGGTATCGATTCGATGCTTTGAA 141000
Query 68627 TGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCG 68686
| ||||| | ||| | |||| ||||| || || || ||||| || | |
Sbjct 141001 TCGATCCGTTGTTGGACAGAATTTGGTTCTTCATGTCTAGATCCCACAGACCCATCGCTG 141060
Query 68687 TTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAG 68746
| ||| || || ||||| | || || | ||||| || || || | || | |||
Sbjct 141061 TCAAATCTTGCAGCAGATGGTGGTTCACCACCTGAAACTCGCCGGAAAGTACACGCCGAT 141120
Query 68747 TGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTG 68806
|||||| || || || ||||| | || || || || |||| ||||| || || |
Sbjct 141121 TGTAAACGTTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCG 141180
Query 68807 ATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTAT 68866
| || || ||||| ||||||| || | ||| | | || || || ||||| |
Sbjct 141181 AAGCGGTAGGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGCAATTTTTT 141240
Query 68867 CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTA 68926
| || | | ||||| ||||||||| || ||| | ||||| | ||||| || |
Sbjct 141241 CCTTCAACTCGGCCCAATTCCAAAGATCCGACGGTTCCTTCTTCCACATTTCGTACTGCA 141300
Query 68927 GAATTCCGTTACTTGCATATGA-TCCATTA-TATGTTTCATAAGGTCCTTCCTGTTCAGC 68984
| || || || ||| | || ||| || || ||||| || ||||| || | | ||
Sbjct 141301 GGATGCCTTTGCTTACCG--GACTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGC 141358
Query 68985 TAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAG 69044
| ||||| || || || ||||| ||||| || |||||||||||||| | | || ||
Sbjct 141359 CAACTCACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAG 141418
Query 69045 ATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCC 69104
| ||| || || || ||| | ||||| | | | ||| || ||||| |||| ||
Sbjct 141419 CTTTTGGGCCTCCTCGCTTTCGTACGGATAGCGCATCAAAATGAACGCATCGGCCATGCC 141478
Query 69105 CTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGG 69164
|||||| || |||||||| || || || | | | || || | | || || || | ||
Sbjct 141479 CTGAACACCGATACCGATCGGCCTGTGCCGCATGTTGGAGCGCTTCGCCTCCGGTACTGG 141538
Query 69165 ATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTT 69224
||| || || ||||| |||||||| || ||||| || | | || | || |||||
Sbjct 141539 ATAGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCGCGACATCCTT 141598
Query 69225 TAGTTTGAGAAAATCAAA----TCGTCCATCTATAACAAACATATTCAGTGCTACAGATG 69280
|| ||| ||| || | | |||| | | |||||||| ||||| || | || |
Sbjct 141599 CAGCTTGGCAAAGTCGTACGTTTTGTCC-GGTTTCACAAACATGTTCAGCGCGATCGAGG 141657
Query 69281 CTAGATTACAAACTGCTA---CCTCATTAGAATTTGCATATTGTATTATCTCTGTACATA 69337
| | ||| || || |||| | || || || | || | | |||||| ||||| |
Sbjct 141658 CCAAATTGCACACCGCTATTTCATCCTTCGA---CGAGTACTCCACTATCTCGGTACACA 141714
Query 69338 GATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCT 69397
|||| ||| || || || || | || |||||||| ||||| ||| || || ||||
Sbjct 141715 GATTGGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCT 141774
Query 69398 TGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGA 69457
|||| || || ||||| || ||||| | ||| |||||||| || | ||| | |
Sbjct 141775 TGTACAGCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGT 141834
Query 69458 CCCTAGCATTTATTACGGTCTTGTAA--CGCTTCTCTTTTTCATATTGTGTATATAGCCG 69515
|| || || | | | | | ||| || ||| | || || || || |||
Sbjct 141835 CCTGTGCCTTCA--CCTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTT 141892
Query 69516 TTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGA 69575
||||| || || |||||| ||| ||||||| || || || | ||| |||||||
Sbjct 141893 CTCGAACTCTTCGCCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCT 141952
Query 69576 CCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAA 69635
||||| || | ||| || || | ||| || ||||| || ||||| || || ||
Sbjct 141953 CCACATTTCGTTCGCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAA 142012
Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695
| || | || | || || || || || ||||| || ||||| |||||||| |
Sbjct 142013 CATGTCGCGGGCACGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAA 142072
Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755
||||| ||||||||||| || || || || | | | || || || || || || ||
Sbjct 142073 TATATCCCCGTGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGCCACC 142132
Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815
|||||| | ||| | ||| ||||| || || || | ||||||||| | | || || ||
Sbjct 142133 CTGATCCACGTACCGGGCCGTGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGTTCGA 142192
Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGAC 69874
| ||||| || || || || || ||||| | |||||||| | | | | || |
Sbjct 142193 AATCCCATTCGTGCCGGAGATGTACGTTCCTTTGGCGCGAAT-GCAGTGCACGTTCAGCC 142251
Query 69875 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCT 69934
| || || || ||| ||| || || || ||||| | || | || || || |||||||
Sbjct 142252 CGATACCGCCGGCCGATTTGGAAATCAGTGCACACTGCTTTAGCGTATCGTAAATACCCT 142311
Query 69935 CTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTT---GATGATGTATAG 69991
| || || || || |||| |||| ||||| || || | | || | || |||
Sbjct 142312 CAATACTGTCGTCCGACATGGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGCTGCGTAG 142371
Query 69992 TTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGT 70051
|||| ||| | || || || || || || || | || |||||||||||||
Sbjct 142372 CGGCCGC---AAACATGGTCGGTGAGGCATGGGTAAAGTAGCGCTCGGAAAGCAGATTGT 142428
Query 70052 ATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
| || || || || | || || || ||| | ||||| || || || || ||||||| |
Sbjct 142429 ACGTCTCGATGGCAGCATCAATGTCTTCACCG-TGAATACCGATGGCAACGCGCATCAGC 142487
Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170
|| || || ||||| || || | ||| || || |||| || || || |||||
Sbjct 142488 ATGTGTTGCGGTCGCTCCACAATCTTACCCTTGATCTTCAGCAAATAGGAACGCTCCAGT 142547
Query 70171 GTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
||||| || || ||||||||||| || || | |||||||| ||
Sbjct 142548 GTTTTGAAGCCGAAATAGTTGTACCCGAAATCACGGTCGTAAATGAT 142594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686708128180440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |