Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq66 98.7 8e-16 >seq66 Length=971934 Score = 98.7 bits (108), Expect = 8e-16 Identities = 234/347 (67%), Gaps = 10/347 (3%) Strand=Plus/Plus Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGA 40921 || |||||| | || || ||||| || || |||| ||| || ||||| ||| || | Sbjct 653773 TGTAGGTGACTTAGGACCGGTTTACGGTTTCCAGTGGCGCCACTTTGGTGCAGCGTACAA 653832 Query 40922 CACTATGT-ACTCTGATTATACCAATAAAGGAATGGATCAATTA-CAGTGCGTTATAGAT 40979 || ||| || ||||| || | ||||| ||||| || || | || || || Sbjct 653833 AAC-ATGCCACGACGATTACACAGGGCAGGGAATCGATCAGTTGGCAAAG-GTGATCGAC 653890 Query 40980 ACGATTAAATCCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACG 41036 ||||| || | |||| |||| || ||||| || || |||| ||||| || | Sbjct 653891 ACGATCAAGAACAATCCGTACGAT---CGTCGTATCATTATGAGCGCTTGGAATCCTTCC 653947 Query 41037 GACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAAT 41096 ||| | | | |||||||||||||| ||||| | || ||||||| |||| || Sbjct 653948 GACATTCCCATCATGGCATTGCCACCGTGTCACTGTTTGGCACAGTTTTTCGTTGCTGAT 654007 Query 41097 GGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTT 41156 || ||||| || || || ||||||| |||| | || | ||| | || || ||||| Sbjct 654008 GGAGAACTCTCCTGCCAGATGTATCAGCGATCGGCCGATGTTGGATTGGGCGTGCCGTTC 654067 Query 41157 AACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 ||||| || || ||| | ||||| || ||||||| || || || || Sbjct 654068 AACATCGCTAGCTATTCACTGCTGACCCATATGATCGCGCATGTCAC 654114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397342790992855