Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq66 91.5 2e-13 >seq66 Length=971934 Score = 91.5 bits (100), Expect = 2e-13 Identities = 221/330 (67%), Gaps = 6/330 (2%) Strand=Plus/Minus Query 31231 GCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAA 31290 || |||| ||| || || | ||| || || |||||||| || || |||||||| | | Sbjct 654105 GCGATCATATGGGTCAGCAGTGAATAGCTAGCGATGTTGAACGGCACGCCCAATCCAACA 654046 Query 31291 TCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTCCGGTCACGTAAAATTGAAAT 31350 ||||| ||||| ||||| | | ||||| ||||| | | | ||| |||| || Sbjct 654045 TCGGCCGATCGCTGATACATCTGGCAGGAGAGTTCTCCATCAGCAACGAAAAACTGTGCC 653986 Query 31351 AACACA-TGACAAGGCGGCAAAGCCATTTCACAGGTAT--CGACGGGATTCCAAGCGCTT 31407 || ||| ||||| || ||||| ||||| | || || || |||||||||||||| Sbjct 653985 AA-ACAGTGACACGGTGGCAATGCCATG--ATGGGAATGTCGGAAGGATTCCAAGCGCTC 653929 Query 31408 ACTAACAAACGCCGACTGGTTGGATCACGCTTAATCTCTTCTATCACGGCTGTTATTTGA 31467 | | | ||| ||| | |||| ||| ||| || ||||| || | ||| Sbjct 653928 ATAATGATACGACGATCGTACGGATTGTTCTTGATCGTGTCGATCACCTTTGCCAACTGA 653869 Query 31468 TCGATTCCTTCACCCGTATAATTACTATCACATCCCTTGTAGGCTGCACCGAAATGTCGC 31527 |||||||| | || || |||| | ||| ||||| |||||||| || || ||| Sbjct 653868 TCGATTCCCTGCCCTGTGTAATCGTCGTGGCATGTTTTGTACGCTGCACCAAAGTGGCGC 653809 Query 31528 CATTGAAACCCATAAATAGGTCCCAGGTCA 31557 || || || || |||| ||||| | |||| Sbjct 653808 CACTGGAAACCGTAAACCGGTCCTAAGTCA 653779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512867728320880