Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq59 107 2e-18
seq7 87.8 2e-12
>seq59
Length=1145648
Score = 107 bits (118), Expect = 2e-18
Identities = 446/689 (65%), Gaps = 25/689 (4%)
Strand=Plus/Plus
Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247
|||| |||||| || || ||| |||| ||||||||||||||||| || || || || ||
Sbjct 141129 TTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCGAAGCGGTA 141188
Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGA 118305
||||| ||||||| || || || |||| || | ||| | ||| |||||| |
Sbjct 141189 GGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGC--AATTTTTTCCTTCA 141246
Query 118306 GAGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGAT 118363
|| |||| | | || | | || ||| || |||||| || |||| |||||
Sbjct 141247 ACTCGGCCCAATTCCAAAGATCCGACG-GT-TCCTTCTTCCACATTTCGTACTGCAGGAT 141304
Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423
|||| | | || || || | || || || || || || | ||||| ||
Sbjct 141305 GCCTTTGCTTACCGGACTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCAACTC 141364
Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483
||||||| || | ||| ||| || |||||||| ||||| | |||| || ||
Sbjct 141365 ACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCA--GCTTT 141422
Query 118484 --GGCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTG 118540
|||||| ||| || ||| || ||| |||||| || |||| || | || ||
Sbjct 141423 TGGGCCTCCTCGCTTTCGTACG-GATAGCGCATCAAAATGAACGCATCGGCCATGCCCTG 141481
Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGA---CTTC-CGAGCGGTCTCCACGG 118596
||||||| || || || | || | ||| || || |||| | |||| || |
Sbjct 141482 AACACCGATACCGATCGGCCTGTGCCGCATGTTGGAGCGCTTCGCCTCCGGT----ACTG 141537
Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 118656
|||| | || ||||||||| | || ||||| || | || ||| | || || |
Sbjct 141538 GATAGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCGCGACATCCT 141597
Query 118657 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTG 118716
||||| | | || | | ||| | || ||| || | || ||||| |
Sbjct 141598 TCAGCTTGGCAAAGTCGTACGTTTT-GTCCGGT--TTCACAAACATGTTCAGCGCGATCG 141654
Query 118717 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACA 118776
| |||| ||| ||||| | | |||||||| | |||||| | || || || ||||
Sbjct 141655 AGGCCAAATTGCACACCGCTATTTCATCCTTCGACGAGTACTCCACTATCTCGGTACACA 141714
Query 118777 AGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 118836
|| |||| ||| |||||||| | ||||| ||||| ||| ||| ||||||||||
Sbjct 141715 GATTGGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCT 141774
Query 118837 TGTAAAGCATGTATGGCGTCCCCGTCTCC 118865
|||| |||||||| || ||||| |||
Sbjct 141775 TGTACAGCATGTACGGAACGCCCGTTTCC 141803
>seq7
Length=4015228
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/176 (73%), Gaps = 4/176 (2%)
Strand=Plus/Plus
Query 179955 CTTCCCACGGAGAGGGAACACACCGTA-GTGATCACGACCAACCACAGAGAGACCAGCAA 180013
||| ||||| | || ||||| ||||| ||| || || || ||||| | || | ||
Sbjct 169998 CTTACCACGCAACGGAAACACTCCGTACGTG-TCGCGTCCGACCACTCCCAACCCGGAAA 170056
Query 180014 CTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTT-TCCAGATTGT 180072
| || || || || || ||||| |||||||| | |||||||||||| || | ||||
Sbjct 170057 CGGCCAGCGTTTTGGCCGAATCTCCCTCCGTAAGGATGAGCGTACAGTTGAGCGAATTGC 170116
Query 180073 GCCGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAATACCAGTAATTTTGGACTT 180128
| ||| || || | ||| ||||| |||| ||| ||||| || |||| ||||||||
Sbjct 170117 G-CGTACCAGCGTCGTTGGCGTCTTCCAGCTTCGGAATGCCCTTAATCTTGGACTT 170171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618254531886760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |