Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq72 107 2e-18
seq24 95.1 1e-14
seq7 89.7 6e-13
>seq72
Length=881775
Score = 107 bits (118), Expect = 2e-18
Identities = 240/356 (67%), Gaps = 6/356 (2%)
Strand=Plus/Minus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | |||||||| || || ||||| ||| || || || ||||| || || |||
Sbjct 354535 CGCTTCTACCAAGCGTCCACCTCGGAACTGTACGGCAAGGTGGCTGAAACGCCGCAGAAC 354476
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTG 7350
|| ||||||| |||||||||||||| |||| ||||| | | ||| | ||
Sbjct 354475 GAAAAGACACCGTTCTACCCACGCTCACCGTACGCCTGTGCAAAGATGTACGG-TTACTG 354417
Query 7351 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7410
| | || | ||| || ||||| | ||| |||| || ||| ||| ||||| |||||
Sbjct 354416 GATTGTGATAAACTATCGCGAAGCGTACAACATGTTCGCCTGCAACGGGATCCTTTTCAA 354357
Query 7411 CCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTACC--GAGGGTATC 7468
||| ||||||||| | ||||| | | |||| || ||| ||||| ||| ||| |
Sbjct 354356 CCACGAATCACCGCGCCGAGGAGAAAACTTCGTTACACGCAAGATCACCCGTTCGGTTGC 354297
Query 7469 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGA 7528
|| | || | || | | |||| | | || ||||||| | || || | |
Sbjct 354296 GAAGATTTC--GCTCGGACAGCAAGAGTACCTGGAGCTGGGTAATCTGGACTCGAAGCGT 354239
Query 7529 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGA 7584
|| ||||| ||||| || ||||| || ||||| |||||||| ||| | || || ||
Sbjct 354238 GACTGGGGCCACGCCAAAGACTACGTGGAAGCGATGTGGCTGATGATGCAGCAGGA 354183
>seq24
Length=2206587
Score = 95.1 bits (104), Expect = 1e-14
Identities = 158/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
|| ||| | |||||| |||| | ||||| | | ||||| || || ||||| | ||
Sbjct 1947815 CTGTTTAATGCCATCGAAACGCTACCGTGCGTGAAGAAGAAGGCAGACTGGGCGCTTAAC 1947756
Query 94774 TGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAG 94833
||| | | ||| | | ||||| ||||| | |||||||||| || |||
Sbjct 1947755 TGGATCTCGAGCAAGAAGGCTAACTTTGGCGAGCGTGTGGTCGCATTTGCTGCCGTCGAG 1947696
Query 94834 GGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892
|||||||||||| || ||| |||| | || | |||||||||||||| || || ||
Sbjct 1947695 GGTATCTTCTTCAGCGGCAGCTT-TGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTTAT 1947637
Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGA 94938
||| ||||| |||||| |||||||| || || | |||||||||
Sbjct 1947636 GCCGGGTCTTACCTTCTCGAACGAGCTGATTTCGAGGGACGAGGGA 1947591
>seq7
Length=4015228
Score = 89.7 bits (98), Expect = 6e-13
Identities = 147/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 168431 GTAAAGATATACCTCGTT-TGAGACGCATCCTTACCACCCATGAGACGCGTACCAAACTG 168489
|| ||||| ||||||| || || |||||| || || | || ||||||||||||||
Sbjct 169039 GTGAAGATGTACCTCGGGCTGGCACT-ATCCTTTCCGCCGGTCAGGCGCGTACCAAACTG 169097
Query 168490 ACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGAC 168549
|| | ||| | || || ||||| ||||| || | ||| | | ||||| ||||
Sbjct 169098 GCCGCCCGGATACAGCAGGTTGATGTTGTTGCTGCCGACGTAATTCTGCGCCAGGTTGAT 169157
Query 168550 AATCGTGTCCGCGAGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACAAAT 168607
|| ||| || |||| |||| ||||||||||||||||| ||| ||||| || ||
Sbjct 169158 GATGGTG-GAGC-AGAGCGACTGCTCACCGTGGTGGTACGCCGACTTTTCTGCCACCGAT 169215
Query 168608 GCCGCCAACTGCGCCACTTTCATCTC 168633
| |||| ||| ||||| |||| |||
Sbjct 169216 CCAGCCAGCTGGGCCACCTTCACCTC 169241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583090407648040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |