Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq59 392 4e-104 >seq59 Length=1145648 Score = 392 bits (434), Expect = 4e-104 Identities = 1199/1839 (65%), Gaps = 26/1839 (1%) Strand=Plus/Plus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || |||||||| || ||||||||||| || ||||| || |||| |||| ||||| || Sbjct 140766 GCCGGTTTTGTTCGCAGATAGTACATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAG 140825 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 || || |||||| ||| ||| | || ||||| | || || || | ||| || Sbjct 140826 TGGATCGATGTCAGCTTGCCATAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGAC 140885 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA---GGAATT 76979 |||||||| || || || | ||||| ||||| || |||| | ||| | | ||| Sbjct 140886 TGATCGATAAACGCACCCCGGTCAGCAGCCATCTT---AATGCACGTTTTAACCGAAATC 140942 Query 76980 TCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG-GTTTGTAT--TTTGAATG 77036 ||||| | |||||| | | | || || | || | | || || ||||||| Sbjct 140943 TCCCACACCGTTTTGTACAGATCGCGTATTTCCTTCGGTATCGATTCGATGCTTTGAATC 141002 Query 77037 GAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTT 77096 || || | || | |||| ||||| || || || ||||| | || |||| Sbjct 141003 GATCCGTTGTTGGACAGAATTTGGTTCTTCATGTCTAGATCCCACAGACCCATCGCTGTC 141062 Query 77097 AAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTG 77156 ||| || || ||||| | || || | ||||| || || || | ||| | ||| || Sbjct 141063 AAATCTTGCAGCAGATGGTGGTTCACCACCTGAAACTCGCCGGAAAGTACACGCCGATTG 141122 Query 77157 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAA 77216 |||| || || || ||||| | || || ||||| ||||| ||||| || || ||| Sbjct 141123 TAAACGTTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCGAA 141182 Query 77217 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 77276 || || ||||| ||||||| || | ||| | || || || || ||||| || Sbjct 141183 GCGGTAGGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGCAATTTTTTCC 141242 Query 77277 TTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGA 77336 || | | ||||| ||||||||| || ||| | | ||| | ||||| || || Sbjct 141243 TTCAACTCGGCCCAATTCCAAAGATCCGACGGTTCCTTCTTCCACATTTCGTACTGCAGG 141302 Query 77337 ATTCCGTTACTAGCATATGA-TCCATTA-TATGTTTCATAAGGTCCTTCTGTTTCAGCTA 77394 || || || || | || ||| || || ||||| || ||||| || | || | Sbjct 141303 ATGCCTTTGCTTACCG--GACTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCA 141360 Query 77395 GTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT 77454 ||||| |||||||||||||||||||| || |||||||||||||| | | || || | Sbjct 141361 ACTCACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAGCT 141420 Query 77455 CTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCT 77514 ||| || || || || ||||||| | | | ||| || ||||| || | |||| Sbjct 141421 TTTGGGCCTCCTCGCTTTCGTACGGATAGCGCATCAAAATGAACGCATCGGCCATGCCCT 141480 Query 77515 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGAT 77574 |||| || ||||| || || || || | | | ||||| || || || || | |||| Sbjct 141481 GAACACCGATACCGATCGGCCTGTGCCGCATGTTGGAGCGCTTCGCCTCCGGTACTGGAT 141540 Query 77575 AATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTA 77634 | || || || || |||||||| || ||||| | | | || | || ||||| | Sbjct 141541 AGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCGCGACATCCTTCA 141600 Query 77635 GTTTAAGAAAATCAAATCTTCCATC---TATAACAAACATGTTCAAAGCTATAGATGCTA 77691 | || ||| || | || || | | ||||||||||||| || || || || | Sbjct 141601 GCTTGGCAAAGTCGTACGTTTTGTCCGGTTTCACAAACATGTTCAGCGCGATCGAGGCCA 141660 Query 77692 GATTACAAACTGCTACCTCATTAGCGTTG--GCATATTGTATTATCTCGGTACATAGATT 77749 ||| || || |||| |||| | | | | || | | |||||||||||| ||||| Sbjct 141661 AATTGCACACCGCTATTTCAT--CCTTCGACGAGTACTCCACTATCTCGGTACACAGATT 141718 Query 77750 ACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATA 77809 ||| || || ||||| | || || || |||||||| ||||| | ||||| || Sbjct 141719 GGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTTGTA 141778 Query 77810 AAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT 77869 || || ||||| || ||||| | ||| |||||||| || | ||| | | | Sbjct 141779 CAGCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGTCCTG 141838 Query 77870 AGCTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAA 77929 || || | | | | |||| | ||| || || ||| || ||| || || Sbjct 141839 TGCCTTCACCTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTCTCGAA 141898 Query 77930 TTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTC 77989 || || |||||| ||| ||||||| ||||| || | ||||||||||| ||| Sbjct 141899 CTCTTCGCCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCTCCACAT 141958 Query 77990 ACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATC 78049 | | ||| || || | ||| || ||||| || ||||| || || || | || Sbjct 141959 TTCGTTCGCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAACATGTC 142018 Query 78050 TCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATC 78109 |||| | || || || || || || || || ||||| |||||||| | ||||| Sbjct 142019 GCGGGCACGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAATATATC 142078 Query 78110 AGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATC 78169 ||||||||||| || || || || | | || || || || || || |||||||| Sbjct 142079 CCCGTGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGCCACCCTGATC 142138 Query 78170 TATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCC 78229 | || | ||| ||||| || ||||| | || ||| || | | ||||| || | || Sbjct 142139 CACGTACCGGGCCGTGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGTTCGAAATCCC 142198 Query 78230 ATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATT 78287 ||| || || || || || |||| | |||||||| | | | | | | ||| || Sbjct 142199 ATTCGTGCCGGAGATGTACGTTCCTTTGGCGCGAATGCAGTGC--ACGTTCAGCCCGATA 142256 Query 78288 CCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATA 78347 || || ||| || || || || || || | || | |||||||| |||||||| ||| Sbjct 142257 CCGCCGGCCGATTTGGAAATCAGTGCACACTGCTTTAGCGTATCGTAAATACCCTCAATA 142316 Query 78348 CTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 78407 ||||| ||| |||| |||| ||||| || || | || || | || | || Sbjct 142317 CTGTCGTCCGACATGGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGCTGCGTAGCGGCC 142376 Query 78408 TTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 78467 ||| | ||||| || ||||| ||||| | || ||||| |||||||| || || Sbjct 142377 GCAAACATGGTCGGTGAGGCATGGGTAAAGTAGCGCTCGGAAAGCAGATTGTACGTCTCG 142436 Query 78468 ATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTG 78526 || || | || ||||| || | ||||| || | || || ||||||| ||| || || Sbjct 142437 ATGGCAGCATCAATGTCTTCACCG-TGAATACCGATGGCAACGCGCATCAGCATGTGTTG 142495 Query 78527 AGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAA 78586 |||| || || ||||| || || |||| ||| || || |||| ||||| || Sbjct 142496 CGGTCGCTCCACAATCTTACCCTTGATCTTCAGCAAATAGGAACGCTCCAGTGTTTTGAA 142555 Query 78587 ACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 || ||||||||||| || || | |||||||| || Sbjct 142556 GCCGAAATAGTTGTACCCGAAATCACGGTCGTAAATGAT 142594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694465861193440