Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq59 309 4e-79 seq24 100 4e-16 >seq59 Length=1145648 Score = 309 bits (342), Expect = 4e-79 Identities = 1190/1851 (64%), Gaps = 26/1851 (1%) Strand=Plus/Plus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || |||||||| || ||||||||||| || ||||| || |||| |||| ||||| || Sbjct 140766 GCCGGTTTTGTTCGCAGATAGTACATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAG 140825 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || ||| || ||| ||| |||| ||||| | || || || | ||| || Sbjct 140826 TGGATCGATGTCAGCTTGCCATAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGAC 140885 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA---GGAATT 75574 |||||||| || || || | ||||| ||||| | ||||| | ||| | | ||| Sbjct 140886 TGATCGATAAACGCACCCCGGTCAGCAGCCATCT---TAATGCACGTTTTAACCGAAATC 140942 Query 75575 TCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA--GATTTG-TATTTTGAATG 75631 ||||| | |||||| | | | || || | || | |||| | | ||||||| Sbjct 140943 TCCCACACCGTTTTGTACAGATCGCGTATTTCCTTCGGTATCGATTCGATGCTTTGAATC 141002 Query 75632 GATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTT 75691 |||||| | || | |||| ||||| || || || ||||| || | || Sbjct 141003 GATCCGTTGTTGGACAGAATTTGGTTCTTCATGTCTAGATCCCACAGACCCATCGCTGTC 141062 Query 75692 AAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTG 75751 ||| || || ||||| | || || | ||||| || || || | ||| | ||| || Sbjct 141063 AAATCTTGCAGCAGATGGTGGTTCACCACCTGAAACTCGCCGGAAAGTACACGCCGATTG 141122 Query 75752 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAA 75811 |||| || || || ||||| | || || ||||| ||||| ||||| || || ||| Sbjct 141123 TAAACGTTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCGAA 141182 Query 75812 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 75871 || || ||||| ||||||| || | ||| | || || || || ||||| || Sbjct 141183 GCGGTAGGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGCAATTTTTTCC 141242 Query 75872 TTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGA 75931 || | | ||||| ||||||||| || ||| | | ||| | ||||| || || Sbjct 141243 TTCAACTCGGCCCAATTCCAAAGATCCGACGGTTCCTTCTTCCACATTTCGTACTGCAGG 141302 Query 75932 ATTCCGTTGC-TAGCATATGATCCATT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTA 75989 || || |||| || | | ||| || || |||||||| | ||||| | || | Sbjct 141303 ATGCCTTTGCTTACCGGA--CTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCA 141360 Query 75990 GTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGAT 76049 || || ||||| || || || ||||| || |||||||||||||| | | || || | Sbjct 141361 ACTCACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAGCT 141420 Query 76050 CTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCT 76109 ||| || || || || | ||||| | | | ||| || ||||| || | |||| Sbjct 141421 TTTGGGCCTCCTCGCTTTCGTACGGATAGCGCATCAAAATGAACGCATCGGCCATGCCCT 141480 Query 76110 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGT 76169 |||| || ||||| || || || || | | | ||||| | || || || | || | Sbjct 141481 GAACACCGATACCGATCGGCCTGTGCCGCATGTTGGAGCGCTTCGCCTCCGGTACTGGAT 141540 Query 76170 AATAATTAATATCTATAATTTTATTGAGATTTC-TGACAACTACTTTAACCACGTCCTTT 76228 | || || ||||| |||||||| || ||||| | | ||| | || | || ||||| Sbjct 141541 AGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAA-AATCTTCGCGACATCCTTC 141599 Query 76229 AGTTTGAGAAAATCAAA---TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCT 76285 || ||| ||| || | ||| | | |||||||||| || || || || || || Sbjct 141600 AGCTTGGCAAAGTCGTACGTTTTGTCCGGTTTCACAAACATGTTCAGCGCGATCGAGGCC 141659 Query 76286 AGATTACAAACGGCTACCTCATTAGCATTG--GCATATTGTATTATCTCCGTGCATAGAT 76343 | ||| || || |||| |||| | | | | || | | |||||| || || |||| Sbjct 141660 AAATTGCACACCGCTATTTCAT--CCTTCGACGAGTACTCCACTATCTCGGTACACAGAT 141717 Query 76344 TACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTAT 76403 | |||||| || || || | || || || |||||||| ||| || | ||||| | Sbjct 141718 TGGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTTGT 141777 Query 76404 AAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTC 76463 | || | ||||| || ||||| | ||| |||||||| || | ||| | | | Sbjct 141778 ACAGCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGTCCT 141837 Query 76464 TAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAA 76523 || || | | | |||| ||| || || || || | | || | Sbjct 141838 GTGCCTTCACCTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTCTCGA 141897 Query 76524 ATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACT 76583 | || || |||||| ||| |||| || || || || | || ||||||| |||| Sbjct 141898 ACTCTTCGCCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCTCCACA 141957 Query 76584 CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 76643 | | ||| || || | ||| || ||||| || ||||| || || || | | Sbjct 141958 TTTCGTTCGCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAACATGT 142017 Query 76644 CTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATAT 76703 | |||| | || || || || || || || || ||||| || ||||| | |||| Sbjct 142018 CGCGGGCACGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAATATAT 142077 Query 76704 CAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGAT 76763 | ||||||||||| || || || || | | || || || || || || ||||||| Sbjct 142078 CCCCGTGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGCCACCCTGAT 142137 Query 76764 CTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTAC 76823 | | || | ||| ||||| || ||||| | || ||| || | | ||||| || | | Sbjct 142138 CCACGTACCGGGCCGTGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGTTCGAAATCC 142197 Query 76824 CATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT-AGGCCTATT 76882 |||| || || || || || |||| || ||||| | | | | || || || Sbjct 142198 CATTCGTGCCGGAGATGTACGTTCCTTTGGCGCGAAT-GCAGTGCACGTTCAGCCCGATA 142256 Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942 || || ||| ||| || || || ||||| | || | || || || || ||||| ||| Sbjct 142257 CCGCCGGCCGATTTGGAAATCAGTGCACACTGCTTTAGCGTATCGTAAATACCCTCAATA 142316 Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002 || || ||| |||| |||| ||||| || || | || || | || | || Sbjct 142317 CTGTCGTCCGACATGGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGCTGCGTAGCGGCC 142376 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062 ||||| || || || ||||| || || | || ||||| |||||||| || || Sbjct 142377 GCAAACATGGTCGGTGAGGCATGGGTAAAGTAGCGCTCGGAAAGCAGATTGTACGTCTCG 142436 Query 77063 ATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTG 77121 || | || || || || || | ||||| || | || || ||||||| ||| || || Sbjct 142437 ATGGCAGCATCAATGTCTTCACCG-TGAATACCGATGGCAACGCGCATCAGCATGTGTTG 142495 Query 77122 AGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAA 77181 ||||| || ||| ||||| || || |||| ||| || || |||| ||||| || Sbjct 142496 CGGTCGCTCCACAATCTTACCCTTGATCTTCAGCAAATAGGAACGCTCCAGTGTTTTGAA 142555 Query 77182 ACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 || ||||||||||| || || | |||||||| || |||| || || Sbjct 142556 GCCGAAATAGTTGTACCCGAAATCACGGTCGTAAATGATGGCCGAGTTCAG 142606 >seq24 Length=2206587 Score = 100 bits (110), Expect = 4e-16 Identities = 258/388 (66%), Gaps = 5/388 (1%) Strand=Plus/Plus Query 46491 CATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTG 46550 ||||| ||||||||||| || | | | |||||| || || | ||| | ||| ||||| Sbjct 1947432 CATCAGATCACAATTCATGCCGAGCATATCGACCGGCAGGGCTTTCGTCAAAAATTCTTG 1947491 Query 46551 TTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCAT 46610 || || || ||||| || ||| || || |||| || |||| Sbjct 1947492 CTCGATCACTACCGCATCGCGGATGATCTCCGTCACGCGCTCCTTCGAAGGCTTCTGCAC 1947551 Query 46611 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAA 46670 || || || ||||| | || || ||||||||||| | || || || || ||| | Sbjct 1947552 CAGATACTTGAACATCAGGCAGGCGAAATCACAATGCAATCCCTCGTCCCTCGAAATCAG 1947611 Query 46671 TTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGC 46730 ||||| || || || || || ||||| || |||||||| |||||||| || || | ||| Sbjct 1947612 CTCGTTCGAGAAGGTAAGACCCGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGACGC 1947671 Query 46731 GAAAGAT-CCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGT 46789 |||| | || ||||| || || || || || || |||||||| | | ||| || Sbjct 1947672 -AAAGCTGCCGCTGAAGAAGATACCCTCGACGGCAGCAAATGCGACCACACGCTCGCCAA 1947730 Query 46790 AACTGGCATCATT--ATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAG 46846 | | || | || || ||||| | | ||||| || ||||| ||||| || || | Sbjct 1947731 AGTTAGCCTTCTTGCTCGAGATCCAGTTAAGCGCCCAGTCTGCCTTCTTCTTCACGCACG 1947790 Query 46847 GCATTGTTTCTATAGCATTAAAGAGAAA 46874 | | ||||| || |||||||| || || Sbjct 1947791 GTAGCGTTTCGATGGCATTAAACAGGAA 1947818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712726125126720