Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq59 309 4e-79
seq24 100 4e-16
>seq59
Length=1145648
Score = 309 bits (342), Expect = 4e-79
Identities = 1190/1851 (64%), Gaps = 26/1851 (1%)
Strand=Plus/Plus
Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457
|| |||||||| || ||||||||||| || ||||| || |||| |||| ||||| ||
Sbjct 140766 GCCGGTTTTGTTCGCAGATAGTACATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAG 140825
Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517
|| || ||| || ||| ||| |||| ||||| | || || || | ||| ||
Sbjct 140826 TGGATCGATGTCAGCTTGCCATAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGAC 140885
Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA---GGAATT 75574
|||||||| || || || | ||||| ||||| | ||||| | ||| | | |||
Sbjct 140886 TGATCGATAAACGCACCCCGGTCAGCAGCCATCT---TAATGCACGTTTTAACCGAAATC 140942
Query 75575 TCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA--GATTTG-TATTTTGAATG 75631
||||| | |||||| | | | || || | || | |||| | | |||||||
Sbjct 140943 TCCCACACCGTTTTGTACAGATCGCGTATTTCCTTCGGTATCGATTCGATGCTTTGAATC 141002
Query 75632 GATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTT 75691
|||||| | || | |||| ||||| || || || ||||| || | ||
Sbjct 141003 GATCCGTTGTTGGACAGAATTTGGTTCTTCATGTCTAGATCCCACAGACCCATCGCTGTC 141062
Query 75692 AAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTG 75751
||| || || ||||| | || || | ||||| || || || | ||| | ||| ||
Sbjct 141063 AAATCTTGCAGCAGATGGTGGTTCACCACCTGAAACTCGCCGGAAAGTACACGCCGATTG 141122
Query 75752 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAA 75811
|||| || || || ||||| | || || ||||| ||||| ||||| || || |||
Sbjct 141123 TAAACGTTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCGAA 141182
Query 75812 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 75871
|| || ||||| ||||||| || | ||| | || || || || ||||| ||
Sbjct 141183 GCGGTAGGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGCAATTTTTTCC 141242
Query 75872 TTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGA 75931
|| | | ||||| ||||||||| || ||| | | ||| | ||||| || ||
Sbjct 141243 TTCAACTCGGCCCAATTCCAAAGATCCGACGGTTCCTTCTTCCACATTTCGTACTGCAGG 141302
Query 75932 ATTCCGTTGC-TAGCATATGATCCATT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTA 75989
|| || |||| || | | ||| || || |||||||| | ||||| | || |
Sbjct 141303 ATGCCTTTGCTTACCGGA--CTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCA 141360
Query 75990 GTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGAT 76049
|| || ||||| || || || ||||| || |||||||||||||| | | || || |
Sbjct 141361 ACTCACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAGCT 141420
Query 76050 CTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCT 76109
||| || || || || | ||||| | | | ||| || ||||| || | ||||
Sbjct 141421 TTTGGGCCTCCTCGCTTTCGTACGGATAGCGCATCAAAATGAACGCATCGGCCATGCCCT 141480
Query 76110 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGT 76169
|||| || ||||| || || || || | | | ||||| | || || || | || |
Sbjct 141481 GAACACCGATACCGATCGGCCTGTGCCGCATGTTGGAGCGCTTCGCCTCCGGTACTGGAT 141540
Query 76170 AATAATTAATATCTATAATTTTATTGAGATTTC-TGACAACTACTTTAACCACGTCCTTT 76228
| || || ||||| |||||||| || ||||| | | ||| | || | || |||||
Sbjct 141541 AGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAA-AATCTTCGCGACATCCTTC 141599
Query 76229 AGTTTGAGAAAATCAAA---TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCT 76285
|| ||| ||| || | ||| | | |||||||||| || || || || || ||
Sbjct 141600 AGCTTGGCAAAGTCGTACGTTTTGTCCGGTTTCACAAACATGTTCAGCGCGATCGAGGCC 141659
Query 76286 AGATTACAAACGGCTACCTCATTAGCATTG--GCATATTGTATTATCTCCGTGCATAGAT 76343
| ||| || || |||| |||| | | | | || | | |||||| || || ||||
Sbjct 141660 AAATTGCACACCGCTATTTCAT--CCTTCGACGAGTACTCCACTATCTCGGTACACAGAT 141717
Query 76344 TACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTAT 76403
| |||||| || || || | || || || |||||||| ||| || | ||||| |
Sbjct 141718 TGGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTTGT 141777
Query 76404 AAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTC 76463
| || | ||||| || ||||| | ||| |||||||| || | ||| | | |
Sbjct 141778 ACAGCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGTCCT 141837
Query 76464 TAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAA 76523
|| || | | | |||| ||| || || || || | | || |
Sbjct 141838 GTGCCTTCACCTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTCTCGA 141897
Query 76524 ATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACT 76583
| || || |||||| ||| |||| || || || || | || ||||||| ||||
Sbjct 141898 ACTCTTCGCCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCTCCACA 141957
Query 76584 CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 76643
| | ||| || || | ||| || ||||| || ||||| || || || | |
Sbjct 141958 TTTCGTTCGCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAACATGT 142017
Query 76644 CTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATAT 76703
| |||| | || || || || || || || || ||||| || ||||| | ||||
Sbjct 142018 CGCGGGCACGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAATATAT 142077
Query 76704 CAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGAT 76763
| ||||||||||| || || || || | | || || || || || || |||||||
Sbjct 142078 CCCCGTGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGCCACCCTGAT 142137
Query 76764 CTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTAC 76823
| | || | ||| ||||| || ||||| | || ||| || | | ||||| || | |
Sbjct 142138 CCACGTACCGGGCCGTGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGTTCGAAATCC 142197
Query 76824 CATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT-AGGCCTATT 76882
|||| || || || || || |||| || ||||| | | | | || || ||
Sbjct 142198 CATTCGTGCCGGAGATGTACGTTCCTTTGGCGCGAAT-GCAGTGCACGTTCAGCCCGATA 142256
Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942
|| || ||| ||| || || || ||||| | || | || || || || ||||| |||
Sbjct 142257 CCGCCGGCCGATTTGGAAATCAGTGCACACTGCTTTAGCGTATCGTAAATACCCTCAATA 142316
Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002
|| || ||| |||| |||| ||||| || || | || || | || | ||
Sbjct 142317 CTGTCGTCCGACATGGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGCTGCGTAGCGGCC 142376
Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062
||||| || || || ||||| || || | || ||||| |||||||| || ||
Sbjct 142377 GCAAACATGGTCGGTGAGGCATGGGTAAAGTAGCGCTCGGAAAGCAGATTGTACGTCTCG 142436
Query 77063 ATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTG 77121
|| | || || || || || | ||||| || | || || ||||||| ||| || ||
Sbjct 142437 ATGGCAGCATCAATGTCTTCACCG-TGAATACCGATGGCAACGCGCATCAGCATGTGTTG 142495
Query 77122 AGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAA 77181
||||| || ||| ||||| || || |||| ||| || || |||| ||||| ||
Sbjct 142496 CGGTCGCTCCACAATCTTACCCTTGATCTTCAGCAAATAGGAACGCTCCAGTGTTTTGAA 142555
Query 77182 ACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232
|| ||||||||||| || || | |||||||| || |||| || ||
Sbjct 142556 GCCGAAATAGTTGTACCCGAAATCACGGTCGTAAATGATGGCCGAGTTCAG 142606
>seq24
Length=2206587
Score = 100 bits (110), Expect = 4e-16
Identities = 258/388 (66%), Gaps = 5/388 (1%)
Strand=Plus/Plus
Query 46491 CATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTG 46550
||||| ||||||||||| || | | | |||||| || || | ||| | ||| |||||
Sbjct 1947432 CATCAGATCACAATTCATGCCGAGCATATCGACCGGCAGGGCTTTCGTCAAAAATTCTTG 1947491
Query 46551 TTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCAT 46610
|| || || ||||| || ||| || || |||| || ||||
Sbjct 1947492 CTCGATCACTACCGCATCGCGGATGATCTCCGTCACGCGCTCCTTCGAAGGCTTCTGCAC 1947551
Query 46611 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAA 46670
|| || || ||||| | || || ||||||||||| | || || || || ||| |
Sbjct 1947552 CAGATACTTGAACATCAGGCAGGCGAAATCACAATGCAATCCCTCGTCCCTCGAAATCAG 1947611
Query 46671 TTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGC 46730
||||| || || || || || ||||| || |||||||| |||||||| || || | |||
Sbjct 1947612 CTCGTTCGAGAAGGTAAGACCCGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGACGC 1947671
Query 46731 GAAAGAT-CCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGT 46789
|||| | || ||||| || || || || || || |||||||| | | ||| ||
Sbjct 1947672 -AAAGCTGCCGCTGAAGAAGATACCCTCGACGGCAGCAAATGCGACCACACGCTCGCCAA 1947730
Query 46790 AACTGGCATCATT--ATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAG 46846
| | || | || || ||||| | | ||||| || ||||| ||||| || || |
Sbjct 1947731 AGTTAGCCTTCTTGCTCGAGATCCAGTTAAGCGCCCAGTCTGCCTTCTTCTTCACGCACG 1947790
Query 46847 GCATTGTTTCTATAGCATTAAAGAGAAA 46874
| | ||||| || |||||||| || ||
Sbjct 1947791 GTAGCGTTTCGATGGCATTAAACAGGAA 1947818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712726125126720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |