Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq349 291 8e-74 >seq349 Length=550016 Score = 291 bits (322), Expect = 8e-74 Identities = 607/896 (68%), Gaps = 20/896 (2%) Strand=Plus/Minus Query 16660 AACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTC 16719 || ||| ||| | | ||||| |||| || || ||||| |||||||||||||| || Sbjct 192972 AATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCATC 192913 Query 16720 TAGAGATATATTCTCCATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTAC 16777 || ||| | ||||||||| ||||||||||| || | |||| |||| | Sbjct 192912 AGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCAC--AA 192855 Query 16778 CCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAG 16837 || ||||| | | || || || || |||||||| ||||| |||||||| | | ||| Sbjct 192854 CCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAA 192795 Query 16838 TTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACC 16897 |||||||| || || | ||| || | || || | || |||| ||| || ||| |||| Sbjct 192794 TTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACA 192735 Query 16898 GCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAAC 16957 || || ||| |||| | ||||| |||| |||||| | ||| |||| ||| Sbjct 192734 GCATCTCGAATTATACCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAGAAC 192675 Query 16958 ATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAAT 17017 | || || || || ||||||||||| || || ||||| ||| | ||| ||||| ||| Sbjct 192674 AGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAAT 192615 Query 17018 GTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAA 17077 || || || ||||| |||||||| |||| ||| ||||| || ||||| ||||| Sbjct 192614 GTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAG 192555 Query 17078 AAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGT-CGCGTCTT- 17135 || |||||||| || || | ||| || ||||| | | ||| || | || | |||| Sbjct 192554 AAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTC 192495 Query 17136 -TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194 ||| ||||| || |||| || || || | | ||| || || || Sbjct 192494 GAGTT---TATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCA 192438 Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAG 17253 || || || || | ||||||| | |||| ||| | ||||| || ||||| | | Sbjct 192437 ATAGCATTGAAAAGGAAGTCTTTTT-GTTTAGGATCGGTAATATAAGTTTCGATCAACAT 192379 Query 17254 GCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGC 17313 |||||||||||| || || || ||||| || ||||| || || || |||||||| || || Sbjct 192378 GCTGTACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGC 192319 Query 17314 TTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 || | || |||||||| | ||||| ||| ||||||| || || || || || || Sbjct 192318 CTCTGTTACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATC 192259 Query 17374 GCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAAC 17433 | || ||||||||||| | | || ||||||| |||||| | | |||| Sbjct 192258 GGAAGCAGCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGT----TATCAGAAA 192203 Query 17434 G----CGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAG 17489 | ||||| | | ||| || |||| ||||||||| || | ||||||||| || Sbjct 192202 GTCTTACCCAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAG 192143 Query 17490 CCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545 | | || | ||| || | ||||||||| ||| || |||||||||| |||| Sbjct 192142 CTTCGGCTTCTTTGTATTTGGCCCAAATATCGGGGTACTGGATGGGGAATATAACA 192087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517477840342320