Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq349 266 3e-66 >seq349 Length=550016 Score = 266 bits (294), Expect = 3e-66 Identities = 571/852 (67%), Gaps = 10/852 (1%) Strand=Plus/Minus Query 15932 TTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATTA 15991 || ||||||||||||||||| || || || ||| | ||| ||||| || |||||| Sbjct 192938 TTCTCGAAGAAGTTAGTTTTGCCATCAGTGGAAATAATGGTCATGAAATCGAAAGGATTA 192879 Query 15992 GTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCT 16051 || | | | ||||| | || ||||| |||| || || || || |||||||| Sbjct 192878 GTGGAGTTATAAATCTTTTCACAACCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCG 192819 Query 16052 ATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTT 16111 ||||| || ||||| | | |||||| ||||| || || | ||| || | || | | Sbjct 192818 ATATACTGGCACATGAGCTTGCAATTCATTCCAATGAGGCTTACGGGTAAGGCATCGGAC 192759 Query 16112 AAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGAC 16171 | ||||| |||||| || |||| || ||| ||| ||| | | |||| | |||| Sbjct 192758 AGAAATTCTTGTTCGATAGCAACAGCATCTCGAATTATACCTACGACTCGATCCTTAGAC 192699 Query 16172 GGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCT 16231 ||| | || || | |||| ||| || || ||||||||||||| ||||| ||| Sbjct 192698 GGTTTCTGTACGAGATACGAGAACAGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCT 192639 Query 16232 CTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAG 16291 || ||| | ||| || || || ||||| || |||||| |||||||| |||| |||| Sbjct 192638 CTAGAGATCAATTCATTAGAGAATGTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAG 192579 Query 16292 AATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAAT 16351 ||||| || || || || || || |||||||| || || | ||| || ||||| | Sbjct 192578 AATATAGCCGCGAAGCTGCCAGAGAAAAATATACCTTCTACCGCTGCGAAGGCGATGATC 192519 Query 16352 CGTTCCGCGTACGTAGCA-TCTTTATTACGA----ATCCATTTCTGTACCCATTCGGCTT 16406 | |||| || | ||| | |||| ||| ||||| || |||| || || | Sbjct 192518 CTTTCCCCGAATGTACTACTCTT-----CGAGTTTATCCAGTTTAAAGCCCAATCAGCCT 192464 Query 16407 TTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATAT 16466 | | | |||| || || || || || || || | ||||||| | | || Sbjct 192463 TCTTACGAACACAAGGCAGGGTCTCAATAGCATTGAAAAGGAAGTCTTTTTGTTTAGGAT 192404 Query 16467 CGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTA 16526 || | ||||| || || |||| | |||||||||||||| || || ||||| || |||| Sbjct 192403 CGGTAATATAAGTTTCGATCAACATGCTGTACATTTCTGAATGGATATTCTCGATAGCTA 192344 Query 16527 TCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCG 16586 | || || ||||| ||||| || ||||| | || || ||||| | |||| ||| Sbjct 192343 TTTGGAAACCATAAAAGCAACGTGCCTCTGTTACCTGAACTTCTTGGCTGAATCTTTCTA 192284 Query 16587 CCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGA 16646 | || |||||||| || || || || ||||| |||||||| | | ||| |||| Sbjct 192283 CTAGATTCTCATTTACTATTCCATCGGAAGCAGCGAAAAACGCGAGAACGTGTGATATGA 192224 Query 16647 AATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTT 16706 ||| |||||| | | ||| | ||| | | | ||| || |||| |||||||| Sbjct 192223 AATGCCTTTCGTTATCAGAAAGTCTTACCCAGTGATCCATATCCTTAGATAAATCCACTT 192164 Query 16707 CTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATT 16766 | |||| |||||||| ||| | || | ||| || | ||||||||| ||| | Sbjct 192163 CCTCTGTGGTCCAAAATGAAGCTTCGGCTTCTTTGTATTTGGCCCAAATATCGGGGTACT 192104 Query 16767 GTATGGGAAATA 16778 | ||||| |||| Sbjct 192103 GGATGGGGAATA 192092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511347443069680