Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq339 192 5e-44 >seq339 Length=1584805 Score = 192 bits (212), Expect = 5e-44 Identities = 404/599 (67%), Gaps = 19/599 (3%) Strand=Plus/Minus Query 18549 GATCGAACAGGAATCGGAACGTTATCTTTATTTGGAATGCAAGCTCGATACAATTT--GC 18606 || || ||||| | || || || ||| | || || |||| || |||| ||| || Sbjct 1112018 GACCGTACAGGGGTGGGTACCTTTTCTATTTTCGGGGCGCAAATGCGGTACACTTTACGC 1111959 Query 18607 GA-AATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAG 18665 || ||| |||||||||| | |||||||| | || |||||| | | || || ||||| Sbjct 1111958 GACAATATATTTCCTCTTCTCACTACAAAAAGGGTATTTTGGCGAGGTGTGGTTGAAGAA 1111899 Query 18666 TTGTTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACAC 18725 || | ||||||||||| || ||| || || ||||| ||| || | ||| Sbjct 1111898 TTACTTTGGTTTATCCGAGGAAACACCAATGCCTTTGAACTAAGTCAGAAAAATGTTCAC 1111839 Query 18726 ATATGGGATATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACAC 18785 |||||||| || | | || |||| || || | || | | | || | Sbjct 1111838 ATATGGGACGCTAACAGTACCAGACAATTCTTAGATTCGGTGGGTCTTAAGGATAGGGAG 1111779 Query 18786 ACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAA 18845 ||| || | || || ||||| || ||||||||||| |||||||| || ||||||||| Sbjct 1111778 GAGGGTGATTTAGGGCCTATTTATGGTTTCCAGTGGAGGCATTTTGGTGCTGAATATAAA 1111719 Query 18846 GACTGTCAATCAAACTATTTACAGCAA----GGAATCGATCAGCTGCAAACTGTTATAGA 18901 || | || ||| ||||| || || ||||||||| || ||||||| | Sbjct 1111718 GAT----ATGCATACTGATTACAAAAATAAAGGTATCGATCAGTTGGCTCATGTTATAAA 1111663 Query 18902 TACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGA 18961 |||||||||||||| ||| | | |||| || || || | |||||||||| || Sbjct 1111662 TACAATTAAAACAAGACCAAATGACAGACGTATAATAATGTGTGCTTGGAATCCTGTCGA 1111603 Query 18962 TATCCCCTTAATGGTACTACCTCCATGTCA----CACGTTATGTCAGTTTTACGTTGCAA 19017 |||||| ||||| |||||||||| || | ||| ||||| || || |||| Sbjct 1111602 TATCCCTGAAATGGCTTTACCTCCATGCCATTGCCTCGTA----CAGTTCTATGTCGCAA 1111547 Query 19018 ACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGT 19077 ||| ||| | || || || |||| || ||||||| || ||||| | || ||||||| Sbjct 1111546 ACGATGAGCTGTCTTGTCAGTTATATCAAAGATCGGCCGACATGGGTTTAGGAGTACCGT 1111487 Query 19078 TCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAA 19136 | || ||||| | ||||| || ||||| || || |||| |||||||||||| | ||| Sbjct 1111486 TTAATATTGCAAGCTATGCGCTGCTTACTTATATGATAGCACATGTTACAGGATTGAAA 1111428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399453002565330