Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq339 185 6e-42 >seq339 Length=1584805 Score = 185 bits (204), Expect = 6e-42 Identities = 356/523 (68%), Gaps = 4/523 (1%) Strand=Plus/Plus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 || ||||| || ||||| |||| | || | |||||| ||||| ||||| || |||||| Sbjct 1111438 GTAACATGTGCTATCATATAAGTAAGCAGCGCATAGCTTGCAATATTAAACGGTACTCCT 1111497 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 || ||||| || || ||||||||||| | ||||| || |||| | | |||||| Sbjct 1111498 AAACCCATGTCGGCCGATCTTTGATATAACTGACAAGACAGCTCATCGTTTGCGACATAG 1111557 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAA 101932 || || | ||| || || || || |||||| ||| || || | ||||||| Sbjct 1111558 AACTGTACGAGGCAATGGCATGGAGGTAAAGCCATTTCAGGGATATCGACAGGATTCCAA 1111617 Query 101933 GCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTT 101992 |||||||||| || | ||| || | || ||||||| || |||| || | || Sbjct 1111618 GCACACATTATTATACGTCTGTCATTTGGTCTTGTTTTAATTGTATTTATAACATGAGCC 1111677 Query 101993 AATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAA 102052 || || || | |||| ||| ||||| | | |||||||||| || || ||| Sbjct 1111678 AACTGATCGATACCTTTATTTTTGTAATCAGTATGCATATCTTTATATTCAGCACCAAAA 1111737 Query 102053 TGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCA 102112 ||||||||||| || ||||| | ||| || | ||| || || || || || | || ||| Sbjct 1111738 TGCCTCCACTGGAAACCATAAATAGGCCCTAAATCACCCTCCTCCCTATCCTTAAGACCC 1111797 Query 102113 AGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGA- 102171 | |||||| ||| ||| | | || || ||||| ||||| | | | |||| Sbjct 1111798 ACCGAATCTAAGAATTGTCTGGTACTGTTAGCGTCCCATATGTGAA--CATTTTTCTGAC 1111855 Query 102172 -TAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTC 102230 ||| || | | || ||||| ||||||||| | | ||||||||| ||||||| Sbjct 1111856 TTAGTTCAAAGGCATTGGTGTTTCCTCGGATAAACCAAAGTAATTCTTCAACCACACCTC 1111915 Query 102231 TCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATTCATTTTC 102273 ||||||||| || || ||||| | ||| |||||| ||| || Sbjct 1111916 GCCAAAATACCCTTTTTGTAGTGAGAAGAGGAAATATATTGTC 1111958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361205085606974