Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1096 385 6e-102 seq349 306 4e-78 >seq1096 Length=295351 Score = 385 bits (426), Expect = 6e-102 Identities = 1227/1889 (65%), Gaps = 39/1889 (2%) Strand=Plus/Minus Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858 ||||||| || || || || || || |||||||| || | | ||||||||| || Sbjct 68969 TTGTCCACGGTAAACTGGATCGGTTTGGCAGCGGGTTTTGTTCTCAAATAGTACATGCCT 68910 Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918 || || || || | ||| ||||| || ||||| | || ||| | || Sbjct 68909 GTCTTAAGCCCCTTGCGCCAGCCGTAGAAGTGCATCGACGAGAGGACACCATATGTTGGT 68850 Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978 | | | | || || |||| | ||||| ||||| |||||||| || | || || ||| Sbjct 68849 TTTTCGACGTGAATGTTCAAACTCTGACTCTGATCAATGAAGGCCCCACGATCGGCGGCC 68790 Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTA-ATATC 53037 || || | |||| || || | ||| ||||| | || || |||| | |||| | || Sbjct 68789 ATATTGAGGATCACTTTCTGCGAAATCTCCCAGACCGTCTTGTAAA-TAGCTTTGAGGTC 68731 Query 53038 TTCTGGAAGGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGAT 53094 ||| |||| | | ||||| ||||| || | | | | || ||| || || Sbjct 68730 TTCAGGAATATCAGGGACGTTCTGGATAGAACCGCAGTTGGCTAAGATTTGATTTTTCAT 68671 Query 53095 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 53154 | |||| ||| | || ||| || || || | || | ||| | || |||| ||| Sbjct 68670 CGTTTCATCCCACAGGCCTCGCTCTGTCAAGTCTTTGAGCAAATGGTGGTTGACTATTTG 68611 Query 53155 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 53214 ||||| || || || || | || |||||||| || ||| || ||||| | || || Sbjct 68610 GAATTCGCCCGATAAGACCCGACGGGTGTAAATGTTTGAGGTGTAAGGTTCAATGGATTC 68551 Query 53215 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 53274 ||| ||||| | || |||||||| || || |||||||||||||| | | || || Sbjct 68550 ATTGTTTCCAAGGATCTGAGCAGTGGAAGCTGTCGGCATAGGTGCTAAAAGTAGCGAGTT 68491 Query 53275 TCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG 53334 |||| |||| | | || || ||||| || | | |||||| |||||| | || Sbjct 68490 CCTAACGCCGTGTTTCGCTATCTTTTCTTTCAGTGCTGCCCAATCCCAAAGGCTGGTAGG 68431 Query 53335 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 53394 ||| |||| || || || || || || |||| ||| Sbjct 68430 CGTAACGTCCCACATGTCATACTGTAAGATCCCTTTGCTAACGG--GA--CTACCATTGT 68375 Query 53395 AT--CGTATG-GT-CCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 53450 | || || || || | | || |||| ||||||||| || || | ||| | || | Sbjct 68374 AAGACGAATAAGTGCCCTTTTGTTCTGCTATTTCACAACTTGCTTCGAGCGCAGCATAGT 68315 Query 53451 AAATGGTTTCGAAGATCTTCTTATTTAG--ATCTTGTGCTTCCAGGCTATCAAATGGATA 53508 |||| || ||||| |||| ||||| || | |||| |||| ||| ||||| || Sbjct 68314 AAATCGTCTCGAATATCTGTTTATTGAGCAAACTTG--CTTCTTCGCTGTCAAAAGGCAT 68257 Query 53509 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 53568 || ||| || || || |||||||| ||||| || || || || || ||||| || | Sbjct 68256 CCGTAGGAGTATGAATGCATCTGCTAAACCTTGTACCCCGATTCCTATGGGTCTGTGGCG 68197 Query 53569 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 53628 |||| || |||| ||||| || |||||| || || | ||||| ||||||| ||| Sbjct 68196 ACTATTTGAATTTTCCGCTTCCTTAACAGGATAGTAGTTCACGTCTATTATTTTATCGAG 68137 Query 53629 GTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC--AAATTGTCCAT-- 53684 |||||| | || |||| | || |||| | ||| || || || ||| Sbjct 68136 GTTTCTCGTTACTAATTTGGTGATGTCTTTCAACATATCAAAGTCGTAAGTTTTCCTGTC 68077 Query 53685 --CTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGC 53742 | | || ||||| || | || || || || | ||| || || || | || | | Sbjct 68076 GGCCTTGACGAACATATTGACGGCTATCGAAGCTAAATTGCATACTGCGATTTCGTCCGG 68017 Query 53743 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 53802 | ||||| || || || ||||| | |||||||| |||||||| || | ||| || Sbjct 68016 TGAAGTATATTCGATGATTTCCGTGCATAAATTACTACTTTTGATGGTACCAAGATTCTG 67957 Query 53803 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAAT 53862 ||| || |||||| | ||||| ||||| || || | || | || || |||||||||| Sbjct 67956 TTGGTTGCTCTTTCTATTACAGGCATCTTTGTACAACATATAAGGAGTGCCAGTTTCAAC 67897 Query 53863 CTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTA--TAGATTTGTATCTC 53920 |||||| | ||||| |||||||| | | | ||| | || | | ||| | || | Sbjct 67896 TTGGGATACAATAATAGCTTTCCAAAGTTCCCTAGCTTGTACTTGTTTGATGTAATTCCC 67837 Query 53921 TT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCA 53978 | ||||| | | | | || | | | ||||| || ||||||||| || | | Sbjct 67836 CTCATTCTCATACTTCTCGT----AGAGTTTCTCAAATTCTTCTCCCCAACAATCGGAAA 67781 Query 53979 ATCCAGGA--CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 54036 || ||| ||| | |||||||| | ||||| | || | | |||||||| Sbjct 67780 GACCCGGAGCCATG--TGAGGACACATAAGAGACCAAACACCATTTGAATCTACTCGTTT 67723 Query 54037 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 54096 ||| || | ||| || ||||| | || ||||| |||||| | || | ||| || || Sbjct 67722 CATGAACAAATCTGGGATCCACAATGCATAAAATAAATCTCTTGCTCGGTATTCTTCCTT 67663 Query 54097 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 54156 || || ||||| || | || |||||| | | | ||||| |||||||||||| ||||| Sbjct 67662 GCCAGTGTTCTTCTTTAAATTAAGGAACTCGAAGACATCAGCATGCCACGGTTCTAAGTA 67603 Query 54157 TATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 54216 ||| | | |||| || ||||| || ||||| || || | || || || ||| |||| Sbjct 67602 TATTGCAAACGCTCCTGGTCGTTTATTGCCTCCTTGGTCGACATACCTTGCCGTGCTATT 67543 Query 54217 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 54276 | |||| ||| ||| || | | ||| || || |||| || || || | ||||| | Sbjct 67542 AAAAACCTTCAGCATAGGTACTAGACCGTTCGACACACCGTTAGTGCCTGCAATATATGT 67483 Query 54277 TCCACTGGCACGAATATTACTAA--TTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334 ||| |||| | ||||| || |||| | || || || || || ||||| || Sbjct 67482 TCCTTTGGCTCTGATATTGTGAACGTTGACA--CCAATACCTCCCGCTGACTTAGAAATA 67425 Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 54394 | |||||| | | | | || ||||| |||||||| || ||| | || Sbjct 67424 TAAGCGCATTGCGCCAGGCAGTTGAAAATACCCTCAATACTATCGTCTGGCATCATTAGA 67365 Query 54395 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 54454 |||||||| ||||| ||| | | ||| ||||| |||||| || ||| ||| Sbjct 67364 AGAAAACAAGAAGACAATTGAGGTCTGGGAGTACCCGCGGAAAATAAAGTTGGACTTGCG 67305 Query 54455 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCAT 54514 || || || || |||| || | | ||| || || || ||||| | |||||| || Sbjct 67304 TGTGTGAAATATCTTTCCGATAACAAATTATAAGTTTCTATAGCGGCGTCTATGTCTTCC 67245 Query 54515 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 54574 ||||||||| || ||||| | ||| | |||||||||||| | |||||| ||||| | Sbjct 67244 CCATGAATTCCCACAGCGACTCTCATGAGCATGTGCTGAGGGCGTTCAACAATCTTCCCG 67185 Query 54575 TTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 54634 || ||||| |||| ||||| || | |||||| ||||| || || ||||| || ||| Sbjct 67184 TTGATTTTGAGCAGATAGGAACGCTCAAGAGTTTTGAAACCGAAGTAATTGTAGGAGAAG 67125 Query 54635 TCTCGTTCGTAAATAATAACTGAGTTGAG 54663 || | || || || || ||||||||| Sbjct 67124 TCCCTGTCATATATGATGCATGAGTTGAG 67096 >seq349 Length=550016 Score = 306 bits (338), Expect = 4e-78 Identities = 603/890 (68%), Gaps = 3/890 (0%) Strand=Plus/Minus Query 23829 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 23888 || ||||| ||| ||| ||||| || || || || ||||| || |||||||| || Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 23889 TCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAAT 23948 || || ||| | |||||||||| | ||||| || ||||| || ||| | | Sbjct 192914 TCAGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAA 192855 Query 23949 CCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAA 24008 || | ||||| || ||| || || |||||||| || ||||| ||| | | ||| Sbjct 192854 CCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAA 192795 Query 24009 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 24068 |||||||| || || | || || | || | | |||||||||||||| |||| || Sbjct 192794 TTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACA 192735 Query 24069 GCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 24128 || ||| || ||| | ||| || | | |||| | | | || ||| Sbjct 192734 GCATCTCGAATTATACCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAGAAC 192675 Query 24129 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 24188 | | || || || ||||| |||| || || |||||| || ||||| || || || Sbjct 192674 AGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAAT 192615 Query 24189 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 24248 || | || ||||||| ||| || ||||| ||||| ||||| | ||| || ||||| Sbjct 192614 GTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAG 192555 Query 24249 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAACCGGCGCTGT 24306 || || || |||||||| || || ||||| || | ||||| || || | | || Sbjct 192554 AAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTC 192495 Query 24307 CA-TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 24365 | | |||||| ||| ||||||||| |||||||| |||||||||| ||||| ||| Sbjct 192494 GAGTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCAATA 192435 Query 24366 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 24425 ||||| || || ||| ||||| ||| ||| ||| ||| || || ||||| | || Sbjct 192434 GCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAACATGCTG 192375 Query 24426 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 24485 |||||||| ||||| || || || || || ||||| || || || || || | ||||| Sbjct 192374 TACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGCCTCT 192315 Query 24486 GTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 24545 || | ||| |||||| | |||| |||| ||| ||| ||||| |||||||| || Sbjct 192314 GTTACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATCGGAA 192255 Query 24546 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTC 24605 || || |||||||| | || ||| ||| |||| |||||| | ||| | | Sbjct 192254 GCAGCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAGAAAGTCTTACC 192195 Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665 || | || ||||| ||||||| ||||||||| || ||||||||||| || || || Sbjct 192194 CAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAGCTTCGGCT 192135 Query 24666 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 | ||| || | ||| || || | || || || || || |||||||| Sbjct 192134 TCTTTGTATTTGGCCCAAATATCGGGGTACTGGATGGGGAATATAACAAA 192085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593643866999520