Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq38 100 2e-16 seq37 86.0 5e-12 >seq38 Length=2283748 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | ||||| ||||||||||| ||||| ||| || ||||| | Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||| |||||| || |||||||| | ||| ||| || Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAG 1208855 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| ||||||| ||||| |||||||| || |||||| ||| | |||| || ||| Sbjct 1208856 CAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAAT 1208915 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 |||||||| ||||| || |||||| ||||| Sbjct 1208916 ATTCAGAAAGAATCGACCCTTCACTTGGTG 1208945 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | ||||| |||||||| |||||||| || ||| ||||| | Sbjct 1208508 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAAACCATCACTTTGGAAGTCGAACCATCT 1208567 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||||| || |||||||| | || ||||| Sbjct 1208568 GACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGGATTCCTCCGGATCAG 1208627 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATT--CCAAAACTATGGCCGATTACA 29139 ||| | ||||| || || ||||| || || |||||| | | ||| | |||| || | Sbjct 1208628 CAACGTCTTATTTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTTT--CCGACTATA 1208685 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||| ||||||||||||||||||||| |||| | || |||| || || Sbjct 1208686 ATATCCAGAAGGAATCTACTCTTCACTTGGTTCTGCGTCTACGTGGTGG 1208734 >seq37 Length=1900120 Score = 86.0 bits (94), Expect = 5e-12 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 25927 TCGAGGTTTGCACGGCTTTCACGTGCACGAATATGGCGACACGAGCAACGGTTGCACGTC 25986 || ||| || ||||| |||||||| ||||||| |||||||| | |||||| |||| || Sbjct 1333595 TCAAGGGTTACACGGTTTTCACGTCCACGAATTTGGCGACAACACCAACGGGTGCATCTC 1333654 Query 25987 GGCCGGTGAGCACTTTAATCCCACCAATGAGGACCACGGCGCTCCCGATG-CTGAAATTA 26045 ||||| | || || || ||| ||| |||| ||||| ||||| || | || || Sbjct 1333655 AGCCGGAGCCCATTTCAACCCCTACAACAAGGAGCACGGGGCTCCGGAGGACTCCAACC- 1333713 Query 26046 GGCATGTTGGCGACTTGGGCAACATA 26071 | || ||||||||||||| ||| || Sbjct 1333714 GTCACATTGGCGACTTGGGGAACGTA 1333739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428281322106470