Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq38 107 2e-18 seq365 84.2 2e-11 seq37 82.4 6e-11 >seq38 Length=2283748 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||| | || |||||||| |||||||||||||| | ||||| | |||| Sbjct 1209631 AGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGTACGACCGTCT 1209572 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| ||| | || | |||||||| || ||| | || |||||||| Sbjct 1209571 TCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCCTCCTTGTCT 1209512 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||| || |||||| | ||| || ||| || || ||||| || |||||| Sbjct 1209511 TGGATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTC 1209452 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | ||||| || || || ||||| Sbjct 1209451 TTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | || || || || ||||| |||||||| | Sbjct 1208962 CCACCACGAAGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAG 1208903 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || || ||||||||||| ||| ||||||||| |||||||| ||| Sbjct 1208902 AGAGTGCGACCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGA 1208843 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| || || ||||| | | | |||||| || || Sbjct 1208842 ATCCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACC 1208783 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || || ||||| ||||| || ||||| Sbjct 1208782 TCCAAGGTGATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| || ||||| || || ||||| | ||||| | | || || ||||| ||||| Sbjct 1209388 GTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCTTCTAGCTGCTTGCCG 1209329 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| ||||||| | ||||| || ||| | ||||| ||||| ||| || ||| Sbjct 1209328 GCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTTGTCTTGGATTTTGGCCTTC 1209269 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | ||||| || || |||| ||| |||||||| || || || ||| Sbjct 1209268 ACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGATGGTCTTTCCCGTCAAGGTT 1209209 Query 21159 TTGACAAATATTTGCATT 21176 |||||||| ||||||||| Sbjct 1209208 TTGACAAAGATTTGCATT 1209191 >seq365 Length=450407 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || | ||| | ||| | || || ||||| |||||||||||||| | Sbjct 426501 CCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGAT 426442 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | || || | |||||| || || |||| || | ||||| || ||| Sbjct 426441 AAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGG 426382 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||||||| ||| || | ||| ||||| || || Sbjct 426381 ATACCTTCTTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACC 426322 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| |||||||| || || || ||||| ||||| || ||||| ||| Sbjct 426321 TCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATGTTG 426271 >seq37 Length=1900120 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 23809 ACGTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGG 23868 ||||| |||| |||||| | ||| || | | | | || || || ||||| || | | Sbjct 1333738 ACGTTCCCCAAGTCGCCAATGTGACGGTTGGAGTCCTCCGGAGCCCCGTGCTCCTTGTTG 1333679 Query 23869 GTGGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGC 23928 |||||| || || | || || || |||| |||||| || ||||||| |||||||| Sbjct 1333678 TAGGGGTTGAAATGGGCTCCGGCTGAGATGCACCCGTTGGTGTTGTCGCCAAATTCGTGG 1333619 Query 23929 ACGTGAAAACCGTGCAGCCC 23948 |||||||||||||| | ||| Sbjct 1333618 ACGTGAAAACCGTGTAACCC 1333599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422205297821384