Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq38 91.5 1e-13 seq37 91.5 1e-13 >seq38 Length=2283748 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | ||||| ||||||||||| ||||| ||| || ||||| | Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||| |||||| || |||||||| | ||| ||| || Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAG 1208855 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| ||||||| ||||| |||||||| | |||||| ||| | |||| || ||| Sbjct 1208856 CAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAAT 1208915 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 ||||| || ||||| || |||||| ||||| Sbjct 1208916 ATTCAGAAAGAATCGACCCTTCACTTGGTG 1208945 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| | ||||| |||||||| |||||||| || ||| ||||| | Sbjct 1208508 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAAACCATCACTTTGGAAGTCGAACCATCT 1208567 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| ||||| || |||||||| | || ||||| Sbjct 1208568 GACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGGATTCCTCCGGATCAG 1208627 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CCAAAACTATGGCCGATTACA 25212 ||| | ||||| || || ||||| || | |||||| | | ||| | |||| || | Sbjct 1208628 CAACGTCTTATTTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTTT--CCGACTATA 1208685 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||| || |||||||||||||||||| |||| | || |||| || || Sbjct 1208686 ATATCCAGAAGGAATCTACTCTTCACTTGGTTCTGCGTCTACGTGGTGG 1208734 >seq37 Length=1900120 Score = 91.5 bits (100), Expect = 1e-13 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 22136 TCGAGGTTTGCACGGCTTTCACGTGCACGAATATGGCGACACGAGCAACGGTTGCACGTC 22195 || ||| || ||||| |||||||| ||||||| |||||||| | |||||| |||| || Sbjct 1333595 TCAAGGGTTACACGGTTTTCACGTCCACGAATTTGGCGACAACACCAACGGGTGCATCTC 1333654 Query 22196 GGCCGGTGAGCATTTTAATCCCACCAATGAGGACCACGGCGCTCCCGATG-CTGAAATTA 22254 ||||| | ||||| || ||| ||| |||| ||||| ||||| || | || || Sbjct 1333655 AGCCGGAGCCCATTTCAACCCCTACAACAAGGAGCACGGGGCTCCGGAGGACTCCAACC- 1333713 Query 22255 GGCATGTTGGCGACTTGGGCAACATAAAG 22283 | || ||||||||||||| ||| || || Sbjct 1333714 GTCACATTGGCGACTTGGGGAACGTAGAG 1333742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410744361018236