Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq349 179 4e-40 seq38 127 2e-24 seq747 123 3e-23 >seq349 Length=550016 Score = 179 bits (198), Expect = 4e-40 Identities = 514/781 (66%), Gaps = 16/781 (2%) Strand=Plus/Plus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650 |||||||| | || || || || |||||||| || ||||| || || ||| || ||| Sbjct 192070 GAGAACCCAGGACGCTTTGTTATATTCCCCATCCAGTACCCCGATATTTGGGCCAAATAC 192129 Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710 ||| | ||||| || || || |||||| ||||| ||||| | || ||||| | | Sbjct 192130 AAAGAAGCCGAAGCTTCATTTTGGACCACAGAGGAAGTGGATTTATCTAAGGATATGGAT 192189 Query 116711 GACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTC 116770 |||||| | | || ||||| | |||||||| ||||| || || |||||| Sbjct 192190 CACTGGGTAAGACTTTCTGATAACGAAAGGCATTTCATATCACACGTTCTCGCGTTTTTC 192249 Query 116771 GCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAG 116830 || || ||| || || || || |||||||| || || | ||| || || || ||| Sbjct 192250 GCTGCTTCCGATGGAATAGTAAATGAGAATCTAGTAGAAAGATTCAGCCAAGAAGTTCAG 192309 Query 116831 GTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAA 116890 || | ||||| || ||||| || || || || || || || ||||| | || || ||| Sbjct 192310 GTAACAGAGGCACGTTGCTTTTATGGTTTCCAAATAGCTATCGAGAATATCCATTCAGAA 192369 Query 116891 ATGTATTCGACCCTCATCGACACGTACGTG--CGCTCTTCGGAGGAGAAG-CTCCGTTTG 116947 ||||| | | ||||| || || | || || | | | ||| || | ||| Sbjct 192370 ATGTACAGCATGTTGATCGAAACTTATATTACCGATCCTAA-ACAAAAAGACTTCCTTT- 192427 Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007 | || || || ||||| |||| || || ||||||| || ||||| | |||| Sbjct 192428 -TCAATGCTATTGAGACCCTGCCTTGTGTTCGTAAGAAGGCTGATTGGGCTTTAAACTGG 192486 Query 117008 ATCGCCG-GCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGG 117066 || | | |||| | | ||||| || | | | |||||||| || || || || Sbjct 192487 ATAAACTCGAAGAGTAGTA-CATTCGGGGAAAGGATCATCGCCTTCGCAGCGGTAGAAGG 192545 Query 117067 CGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCC 117126 | || || || ||||| ||||| || ||||| ||||| || ||||| ||| | ||||| Sbjct 192546 TATATTTTTCTCTGGCAGCTTCGCGGCTATATTCTGGCTAAAAAAACGAGGCTTAATGCC 192605 Query 117127 CGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGC 117186 ||| | || ||| || || | ||||| || || || || | |||||||||||||| Sbjct 192606 TGGCTTAACATTCTCTAATGAATTGATCTCTAGAGATGAAGGGTTACATTGCGACTTTGC 192665 Query 117187 CTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTC--AGGGAGA-- 117242 || | |||||| | || | || ||| |||| || || ||| ||| | | Sbjct 192666 TTGCCTACTGTTCTCGTATCTCGTACAGAAACCGTCTAAGGATCGAGTCGTAGGTATAAT 192725 Query 117243 TCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTC 117302 ||| || || || || ||||| || || || |||| || | || || | | Sbjct 192726 TCG----AGATGCTGTTGCTATCGAACAAGAATTTCTGTCCGATGCCTTACCCGTAAGCC 192781 Query 117303 TGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGC 117362 | | ||| | |||||| | |||| || || ||||| || |||||||||||| ||| Sbjct 192782 TCATTGGAATGAATTGCAAGCTCATGTGCCAGTATATCGAATTTGTCGCCGACAGGTTGC 192841 Query 117363 T 117363 | Sbjct 192842 T 192842 >seq38 Length=2283748 Score = 127 bits (140), Expect = 2e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || |||||||| | |||||||| ||||||||| | || |||||| | || Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | ||||| | |||| ||||||| |||||||| || || ||| | ||||| Sbjct 1208796 GATACTATTGAAAACG-TGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCA 1208854 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||||||| || | || ||||||||||| || || | ||||| ||| |||||| || Sbjct 1208855 GCAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAA 1208914 Query 40869 CATCCAGAAGGA 40880 || ||||| || Sbjct 1208915 TATTCAGAAAGA 1208926 Score = 123 bits (136), Expect = 3e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || || ||||| |||||| |||| || || | | Sbjct 1208279 AATGCAGATCTTCGTGAAGACACTGACTGGTAAAACTATCACCCTCGAGGTGGAGCCGTC 1208338 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | | | |||| | |||| || || | ||||||||||||||||| | || | Sbjct 1208339 CGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGATC 1208397 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | | |||| ||| ||||||||| |||| |||| ||| ||| | ||||||| Sbjct 1208398 AGCAGAGGTTGATCTTCGCCGGCAAACAGTTGGAGGACGGGCGTACCTTGTCGGACTACA 1208457 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| |||| Sbjct 1208458 ACATCCAGAAGGAATCCACCTTGCA 1208482 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||||||||| | ||||| || |||||||| | || |||||| | || Sbjct 1208964 ATGCAGATCTTCGTAAAAACCTTGACGGGAAAGACCATCACTCTGGAAGTCGAACCATCC 1209023 Query 40750 GACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || |||| |||||| ||||| | ||||| ||||| || ||| | ||||| Sbjct 1209024 GATACCATTGAGAACG-TCAAGGCCAAAATCCAAGACAAGGAGGGGATTCCCCCAGACCA 1209082 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || || | || ||||| ||||| || || | |||||||| |||||||| Sbjct 1209083 GCAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCTGACTACAA 1209142 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || || |||| || || Sbjct 1209143 TATCCAAAAAGAATCCACCCTTCA 1209166 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | ||||| ||||||||||| | || |||||| | | Sbjct 1208508 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAAACCATCACTTTGGAAGTCGAACCATCT 1208567 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||||| | |||||||| || || || |||| ||| Sbjct 1208568 GACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGGATTCCTCCGGATCAG 1208627 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || || | ||| ||||| ||||| || || | ||||| || |||||| || Sbjct 1208628 CAACGTCTTATTTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTTTCCGACTATAAT 1208687 Query 40870 ATCCAGAAGGA 40880 ||||||||||| Sbjct 1208688 ATCCAGAAGGA 1208698 >seq747 Length=644639 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| ||||| |||||||| ||||| ||||| | || |||||| | | Sbjct 452934 AATGCAAATTTTCGTGAAAACCCTCACGGGGAAAACTATCACGCTAGAGGTCGAACCATC 452993 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | || | ||||| | ||||||||||| || || | || || Sbjct 452994 TGATACTATCGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGGATTCCTCCAGATCA 453053 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| ||| || ||||| || || || | || || | |||||||| Sbjct 453054 GCAACGTCTGATCTTCGCTGGTAAACAACTTGAAGATGGACGTACATTGTCTGACTACAA 453113 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || || || | || ||||| ||||| || || Sbjct 453114 CATCCAGAAGGAGTCTACCCTTCACTTGGTATTGCGTTTGAGAGGTGG 453161 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||||||||| |||||||| ||||| ||||| | || ||||| | | Sbjct 462718 ATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACTATCACGCTAGAGGTCGAGCCTTCT 462659 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||||| | ||| |||| | | |||||||||||||| || | || || Sbjct 462658 GACACAATAGAAAACGTTAAAGCTAAAA-TCCAGGACAAAGAGGGCATTCCTCCTGATCA 462600 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | |||| ||| |||||||| || || || | || || || |||||||| Sbjct 462599 ACAGCGTTTGATCTTCGCAGGCAAACAACTTGAAGATGGACGTACTCTTTCTGACTACAA 462540 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| ||||| | || || || | || || || |||||||||||| Sbjct 462539 TATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTTGAGGGGCGGC 462491 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||||||||| || ||||| || |||||||| | || ||||| | | Sbjct 466194 ATGCAAATTTTCGTAAAAACCCTAACGGGTAAGACCATCACGCTAGAGGTCGAGCCTTCT 466135 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | ||||| | ||| |||| | | |||||||| || || || | || || Sbjct 466134 GACCCAATAGAAAACGTTAAAGCTAAAA-TCCAGGACAAAGAAGGTATTCCTCCCGATCA 466076 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | |||| |||||| ||||| || || || | |||||| | |||||||| Sbjct 466075 ACAGCGTTTGATCTTCGCGGGTAAACAACTAGAAGATGGGCGCACTCCTTCTGACTACAA 466016 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 ||||| ||||| | || || || | || || || ||||||||||||||| Sbjct 466015 TATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTTGAGGGGCGGCGGC 465964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515151744926240