Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq339 163 2e-35 >seq339 Length=1584805 Score = 163 bits (180), Expect = 2e-35 Identities = 350/521 (67%), Gaps = 18/521 (3%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 || ||||| || |||||| |||| | || | |||||| ||||| ||||| || || ||| Sbjct 1111438 GTAACATGTGCTATCATATAAGTAAGCAGCGCATAGCTTGCAATATTAAACGGTACTCCT 1111497 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 | ||||| || || |||||||||||||||||||| || |||| | | ||||| Sbjct 1111498 AAACCCATGTCGGCCGATCTTTGATATAACTGACAAGACAGCTCATCGTTTGCGACATAG 1111557 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| | ||| || || || || ||||||| || | ||| | ||||||| Sbjct 1111558 AACTGTACGAGGCAATGGCATGGAGGTAAAGCCATTTCAGGGATATCGACAGGATTCCAA 1111617 Query 97297 GCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTT 97356 |||||||| | || | ||| || |||| |||| | || ||||| || | || Sbjct 1111618 GCACACATTATTATACGTCTGTCATTTGGTCTTGTTTTAATTGTATTTATAACATGAGCC 1111677 Query 97357 AATTGATCAACGCCT---TCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCA 97413 || ||||| | ||| | | || | | ||| | | ||| |||||| || ||| Sbjct 1111678 AACTGATCGATACCTTTATTTTTGTAATCAGTATGC---ATATCTTTATATTCAGCACCA 1111734 Query 97414 AAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAA 97473 ||||||||||| ||||| ||||||| ||| || | || || || || ||||| | | Sbjct 1111735 AAATGCCTCCACTGGAAACCATAAATAGGCCCTAAATCACCCTCCTCCCTATCCTTAAGA 1111794 Query 97474 CCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACA----CCAGA 97529 || | | |||||| | || | | || || ||||| ||||| ||| | || Sbjct 1111795 CCCACCGAATCTAAGAATTGTCTGGTACTGTTAGCGTCCCATATGTGAACATTTTTCTGA 1111854 Query 97530 --TGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACA 97587 | | ||| | ||| ||| ||||| ||||||||| | |||||||| || Sbjct 1111855 CTTAGTTCAAAGGCATTGGTGT------TTCCTCGGATAAACCAAAGTAATTCTTCAACC 1111908 Query 97588 ACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 ||||||| ||||||||| || || || || | |||||||| Sbjct 1111909 ACACCTCGCCAAAATACCCTTTTTGTAGTGAGAAGAGGAAA 1111949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346739732372180