Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq339 185 1e-41 seq747 118 2e-21 seq38 113 7e-20 seq365 107 3e-18 >seq339 Length=1584805 Score = 185 bits (204), Expect = 1e-41 Identities = 258/360 (72%), Gaps = 9/360 (3%) Strand=Plus/Plus Query 205449 ATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACC 205508 |||||| ||||||||||| | | ||| || |||| |||||| ||||| |||||||| Sbjct 1111443 ATGTGCTATCATATAAGTAAGCAGCGCATAGCTTGCAATATTAAACGGTACTCCTAAACC 1111502 Query 205509 CATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTATTAATTACATGAAA 205568 ||| || || ||||||||||| | ||||| | || | || || |||| || Sbjct 1111503 CATGTCGGCCGATCTTTGATATAACTGACAAGACAGCTC---ATCGTTTGCGACATAGAA 1111559 Query 205569 TTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCA---ACATCTATAGGATTCCA 205625 ||||| | ||||| || || |||| | |||| |||| | ||| | ||||||||| Sbjct 1111560 CTGTACGAGGCAATGGCATGGAGGTAAAGCCAT---TTCAGGGATATCGACAGGATTCCA 1111616 Query 205626 GGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATATGTGT 205685 || | ||||||| ||| | ||| | |||| ||| ||||||||| ||| | Sbjct 1111617 AGCACACATTATTATACGTCTGTCATTTGGTCTTGTTTTAATTGTATTTATAACATGAGC 1111676 Query 205686 TAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAA 205745 || ||||| | |||| |||| | |||| |||| |||||| |||||| ||||||||| Sbjct 1111677 CAACTGATCGATACCTTTATTTTTGTAATCAGTATGCATATCTTTATATTCAGCACCAAA 1111736 Query 205746 ATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACC 205805 ||| | ||| || |||||||||| || ||||||||||| || | ||||| |||| ||| Sbjct 1111737 ATGCCTCCACTGGAAACCATAAATAGGCCCTAAATCACCCTCCTCCCTATCCTTAAGACC 1111796 >seq747 Length=644639 Score = 118 bits (130), Expect = 2e-21 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 ||||||||||| || | || || || || || |||||||| || ||||| | ||| || Sbjct 452932 ACAATGCAAATTTTCGTGAAAACCCTCACGGGGAAAACTATCACGCTAGAGGTCGAACCA 452991 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 |||||| || ||| | ||| ||||| ||||| ||||| || || || || ||| Sbjct 452992 TCTGATACTATCGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGGATTCCTCCAGAT 453051 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || ||| | || || || || || |||||| | || ||| | || ||||| || || Sbjct 453052 CAGCAACGTCTGATCTTCGCTGGTAAACAACTTGAAGATGGACGTACATTGTCTGACTAC 453111 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 || || || || || || || | || ||||| || ||||| |||||||||||| Sbjct 453112 AACATCCAGAAGGAGTCTACCCTTCACTTGGTATTGCGTTTGAGAGGTGGTATTA 453166 Score = 100 bits (110), Expect = 4e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || |||| || || || || |||||||| || ||||| | || | | Sbjct 462718 ATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACTATCACGCTAGAGGTCGAGCCTTCT 462659 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| || | ||| ||||| || || ||||| || || || ||||||||| Sbjct 462658 GACACAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAGGGCATTCCTCCTGATCAA 462599 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || || ||||| |||||| | || ||| | || || | || || ||| Sbjct 462598 CAGCGTTTGATCTTCGCAGGCAAACAACTTGAAGATGGACGTACTCTTTCTGACTACAAT 462539 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTT 124756 || ||||| |||||||| | || ||||||||||| || Sbjct 462538 ATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTT 462501 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || |||| || ||||| || || || || || ||||| | || | | Sbjct 466194 ATGCAAATTTTCGTAAAAACCCTAACGGGTAAGACCATCACGCTAGAGGTCGAGCCTTCT 466135 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||| || | ||| ||||| || || ||||||||||| || || |||||| Sbjct 466134 GACCCAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAAGGTATTCCTCCCGATCAA 466075 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || || || || |||||| |||| ||| | || || || || ||| Sbjct 466074 CAGCGTTTGATCTTCGCGGGTAAACAACTAGAAGATGGGCGCACTCCTTCTGACTACAAT 466015 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTT 124756 || ||||| |||||||| | || ||||||||||| || Sbjct 466014 ATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTT 465977 >seq38 Length=2283748 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| |||| || | || ||||| || || || | ||| | ||| | Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || | || ||||||||||| |||||||| || || || || || Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAG 1208855 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||||||||| || ||||| |||| ||| |||| || | || |||||| Sbjct 1208856 CAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAAT 1208915 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| || | || ||||| | ||| | || |||||||| Sbjct 1208916 ATTCAGAAAGAATCGACCCTTCACTTGGTGCTCCGTCTTCGTGGTGGTAT 1208965 Score = 102 bits (112), Expect = 1e-16 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || | || || || || || || | ||| ||||| | Sbjct 1209191 AATGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTC 1209250 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| || | || ||||| ||||| |||||||| || || || ||||| Sbjct 1209251 CGATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCA 1209310 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | ||||||||||| || || || |||| ||| | || || | || || || Sbjct 1209311 GCAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAA 1209370 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| ||||||||||| || | || |||||| | ||| | || ||||| || Sbjct 1209371 TATCCAAAAAGAATCCACCCTTCACTTGGTTCTGCGTCTCCGTGGTGGCAT 1209421 Score = 86.0 bits (94), Expect = 9e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || |||| || | || || || || || ||| | || | ||| || Sbjct 1208964 ATGCAGATCTTCGTAAAAACCTTGACGGGAAAGACCATCACTCTGGAAGTCGAACCATCC 1209023 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || | || ||||| ||||| || || || || || || || || Sbjct 1209024 GATACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAGGAGGGGATTCCCCCAGACCAG 1209083 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||||||||| || || || |||| ||| | || || | || || ||| Sbjct 1209084 CAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCTGACTACAAT 1209143 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||| || | || |||||| ||||| | || ||||| || Sbjct 1209144 ATCCAAAAAGAATCCACCCTTCACTTGGTTCTACGTCTCCGTGGTGGAAT 1209193 >seq365 Length=450407 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| |||| || | ||||| || || || || | ||| ||||| | Sbjct 426275 ATGCAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCTTGAGGTTGAACCGTCA 426334 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | ||| || || ||||| ||||||||||| || |||||||| Sbjct 426335 GATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAAGAAGGTATCCCCCCTGATCAG 426394 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || ||||| || || ||||| ||||| ||| | || || ||| || ||||| Sbjct 426395 CAACGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTACCTTATCCGACTATAAC 426454 Query 124719 ATTCAAAAAGAATCAAC 124735 ||||| || |||||||| Sbjct 426455 ATTCAGAAGGAATCAAC 426471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755357091923200