Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq365 109 5e-19 seq38 107 2e-18 seq747 104 2e-17 >seq365 Length=450407 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || | ||||||||| | || | || || || || |||||||| || ||| Sbjct 426501 CCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGAT 426442 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || ||| || | |||||| |||||| | || ||||| |||||||| || || Sbjct 426441 AAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGG 426382 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || || |||||| || ||| ||| || | |||| ||| || | || ||| Sbjct 426381 ATACCTTCTTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACC 426322 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | ||| | || || || |||| |||||||||||||||||||||| Sbjct 426321 TCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATG 426274 >seq38 Length=2283748 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || || || |||||||| || || || ||| ||||| Sbjct 1208488 ACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCGTCCTCC 1208429 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | |||||| || ||| |||| | | ||||||||||||||| |||||||| ||||| Sbjct 1208428 AACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCCTGG 1208369 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| ||||||| ||| | ||||| Sbjct 1208368 ATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAGTTTTA 1208309 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || |||||||| Sbjct 1208308 CCAGTCAGTGTCTTCACGAAGATCTGCAT 1208280 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | || | ||| | |||| || ||||| || |||||||| || ||| Sbjct 1209646 CCTCCACGGAGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAA 1209587 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || || || ||||| || || || |||| | | ||||||||| || || Sbjct 1209586 AGGGTACGACCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 1209527 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690 || |||||||||||| ||||| ||| || | ||||| |||||| | || | ||||| Sbjct 1209526 ATCCCCTCCTTGTCTTGGATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGT-TCGAC 1209468 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | || | || ||||||||||| ||||| || || ||||||||| Sbjct 1209467 TTCCAAAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATG 1209419 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || || ||||| ||||| || || ||| | |||||| ||| || Sbjct 1208945 CACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTC 1208886 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| || || | || || || ||||| || || || || || || |||||| Sbjct 1208885 TAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTG 1208826 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 |||||| || || | ||| | || || | |||||||| | ||| | || || Sbjct 1208825 AATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTT 1208766 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| |||| ||||||||||| |||||||| Sbjct 1208765 GCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || |||||||| || ||||| || | ||||| ||| || Sbjct 1209172 ACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCATCTTCT 1209113 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || | || ||||| ||||| || || || || |||||||||||| Sbjct 1209112 AGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTGG 1209053 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| || || | || | ||| || | || | ||||| || | || | || || Sbjct 1209052 ATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGT-TCGACTTCCAGAGTGATGGTCTT 1208994 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| |||||||| || |||||||| Sbjct 1208993 TCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 >seq747 Length=644639 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 118527 AACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCC 118586 || |||||||| | || || || ||||| || ||||| || ||||||| ||| Sbjct 465983 AAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGCCCATCT 466042 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || || ||||| || ||| |||| | |||||| ||||||||||| || || || ||||| Sbjct 466043 TCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTGTCC 466102 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 ||||| |||||| | ||| | | ||| | ||||||||| | || | || Sbjct 466103 TGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATGGTC 466162 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || |||||||| ||||| ||||| Sbjct 466163 TTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433775020736008