Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq17 84.2 4e-11 >seq17 Length=2144227 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/227 (69%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 45589 ACTTTG-TAACAGTGCACCATTTTTCAGATTTTGTATCGTAGCATCCCAT-AAGAAAACT 45646 |||||| |||| ||||| |||||| | || | || |||||| ||||| |||||||| Sbjct 1931510 ACTTTGGTAACGGTGCAGAATTTTTTATTGTTCGGATTGTAGCAACCCATCAAGAAAAC- 1931452 Query 45647 GGATAAAATACCAGACTTGTTACCCTTTCCGTAATAAGCACCCAAAACTACTAGATCAGC 45706 ||| | || || || || || |||| || |||| || ||||| | || ||| || Sbjct 1931451 GGACATCATTCCTCCTTTCTTGCCTGTTCCATACCAAGCCCCTAAAACGATTAAATCTGC 1931392 Query 45707 TTTATCCGCCATAACACATCCATCTAAGTAGTCtttttttATTTTCAGCCATCTACGCAT 45766 | |||||||||| | | || | |||||| ||||| | |||| ||| | | Sbjct 1931391 TGTATCCGCCATCGCCCCACCGAAGAGGTAGTCCTTTTTCACCTTCAACCAGTGCCTTTT 1931332 Query 45767 ACCAGGTTCGTATACACCTTTTGCATCTTTGAGTACAAACCCTTCTA 45813 |||||||||||||| || ||| ||||| | || | ||||||| Sbjct 1931331 ACCAGGTTCGTATATACTTTTCATGTCTTTCAACACCAGACCTTCTA 1931285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923075930458960