Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1174 113 5e-20 seq20 111 2e-19 seq315 109 6e-19 seq539 107 2e-18 seq59 107 2e-18 seq7351 105 8e-18 seq1607 105 8e-18 seq144 105 8e-18 seq134 105 8e-18 seq85 105 8e-18 seq73 105 8e-18 seq656 104 3e-17 seq16 102 9e-17 seq747 91.5 2e-13 seq38 89.7 6e-13 >seq1174 Length=363067 Score = 113 bits (124), Expect = 5e-20 Identities = 81/92 (88%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 60051 TTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 60110 |||| ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 41704 TTTAATAAAAAAGTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 41645 Query 60111 ACATACTCACCACTATACTACCGAGGA-TTGA 60141 ||||| ||||||||||||||||||| |||| Sbjct 41644 GGATACTTACCACTATACTACCGAGGACTTGA 41613 Score = 111 bits (122), Expect = 2e-19 Identities = 76/86 (88%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 43012 AAAAGCTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 43071 Query 60118 CACCACTATACTACCGAGGATTGAAT 60143 ||||||||||||||||||| | ||| Sbjct 43072 TACCACTATACTACCGAGGACTTAAT 43097 Score = 111 bits (122), Expect = 2e-19 Identities = 88/105 (84%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 60039 AACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCG 60098 ||||||| ||||| |||| | | |||| |||| ||||||||||||| ||||||||| Sbjct 45249 AACAAAT---CGTTTCAAAAAAGTATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCG 45305 Query 60099 CGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTGAAT 60143 |||||||||||| ||||| ||||||||||||||||||| | ||| Sbjct 45306 CGTGACAGGCGGGGATACTTACCACTATACTACCGAGGACTTAAT 45350 Score = 107 bits (118), Expect = 2e-18 Identities = 76/87 (87%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 43317 AAAAAAAGTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 43376 Query 60117 TCACCACTATACTACCGAGGATTGAAT 60143 | ||||||||||||||||||| | ||| Sbjct 43377 TTACCACTATACTACCGAGGACTTAAT 43403 Score = 107 bits (118), Expect = 2e-18 Identities = 76/87 (87%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 45522 AAAAAAAGTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 45581 Query 60117 TCACCACTATACTACCGAGGATTGAAT 60143 | ||||||||||||||||||| | ||| Sbjct 45582 TTACCACTATACTACCGAGGACTTAAT 45608 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 45778 AAAAAAAGTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 45837 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 45838 TTACCACTATACTACCGAGGAT 45859 Score = 105 bits (116), Expect = 8e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 41290 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 41231 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 41230 ATACTACCGAGGA 41218 >seq20 Length=3291450 Score = 111 bits (122), Expect = 2e-19 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 1183688 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1183747 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 1183748 TTACCACTATACTACCGAGGA 1183768 Score = 109 bits (120), Expect = 6e-19 Identities = 78/90 (87%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 60049 CGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGC 60108 ||||| ||||| | |||| |||| ||||||||||||| ||||||||||||||||||| Sbjct 1180031 CGTTTTAAAAAAAGTGCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGC 1179972 Query 60109 GGACATACTCACCACTATACTACCGAGGAT 60138 || ||||| |||||||||||||||||||| Sbjct 1179971 GGGGATACTTACCACTATACTACCGAGGAT 1179942 >seq315 Length=967829 Score = 109 bits (120), Expect = 6e-19 Identities = 77/88 (88%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 60051 TTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 60110 |||| ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 176556 TTTAAAAAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 176497 Query 60111 ACATACTCACCACTATACTACCGAGGAT 60138 ||||| |||||||||||||||||||| Sbjct 176496 GGATACTGACCACTATACTACCGAGGAT 176469 >seq539 Length=596470 Score = 107 bits (118), Expect = 2e-18 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| | Sbjct 144899 ATAAAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 144958 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| ||||||||||||||||||| Sbjct 144959 TACTTACCACTATACTACCGAGGA 144982 >seq59 Length=1770912 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 1549812 AAAAAAGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1549753 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 1549752 TGACCACTATACTACCGAGGAT 1549731 >seq7351 Length=5596 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 709 AAAAAAGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 768 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 769 TTACCACTATACTACCGAGGA 789 >seq1607 Length=25715 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 13061 AAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 13120 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 13121 TGACCACTATACTACCGAGGA 13141 >seq144 Length=972815 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 700224 AAAAAAGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 700283 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 700284 TGACCACTATACTACCGAGGA 700304 >seq134 Length=1111970 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 340592 AAAAAAGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 340533 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 340532 TTACCACTATACTACCGAGGA 340512 >seq85 Length=1220989 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 772937 AAAAAACTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 772878 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 772877 TTACCACTATACTACCGAGGA 772857 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 817604 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 817545 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 817544 TACTACCGAGGA 817533 >seq73 Length=920327 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 172740 AAAAAAATACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 172799 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 172800 TGACCACTATACTACCGAGGA 172820 >seq656 Length=509386 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 82093 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 82034 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 82033 TACTACCGAGGA 82022 >seq16 Length=2731894 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 433218 AAAAAAGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGGTAC 433159 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 433158 TTACCACTATACTACCGAGGA 433138 >seq747 Length=644639 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| |||||||| ||||| || | || |||||| || || ||||| |||| | Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 453102 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || || || ||||||||||| || || || ||||| || | || Sbjct 453101 AATGTACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGGA 453042 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||| ||||| |||||| ||| | | | | || || | ||| || Sbjct 453041 ATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGACC 452982 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | |||||| ||||| ||||| || || || || || ||||||||| Sbjct 452981 TCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCATT 452934 >seq38 Length=2283748 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| || ||||| |||||||| |||| || || || | || ||| Sbjct 1209172 ACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCATCTTCT 1209113 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || || || |||||||| | || | | ||||||||| | Sbjct 1209112 AGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTGG 1209053 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 ||||| |||| || | | || ||| | ||| || || | |||||||| || Sbjct 1209052 ATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGTGATGGTCTTT 1208993 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| | || ||||| ||||| ||||| Sbjct 1208992 CCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571742734780720