Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq38 89.7 8e-13 seq17 84.2 3e-11 >seq38 Length=2283748 Score = 89.7 bits (98), Expect = 8e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 ||||| || | ||||||||| || |||||||| || ||||| || | | ||| ||| Sbjct 1208716 ACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCCATCTTCT 1208657 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | || || || || ||||| | | |||||||||||||||||| |||||||| ||||| Sbjct 1208656 AGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTG 1208598 >seq17 Length=2144227 Score = 84.2 bits (92), Expect = 3e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 24013 CCTTTTACAAGTTTAACATAATCA-CATTTATCAAACCATCTTGCGTGTTGTATCCAAGG 24071 ||||| || ||||||||| ||| | || || ||||| || || |||| ||||||| Sbjct 44243 CCTTTAACTAGTTTAACA-AATGAGCAATTTGGGAACCACCTAGCATGTTCCGTCCAAGG 44301 Query 24072 ATCATCGTCTGTTTCCCATTTATTTAAACCACCATCACAATAAAAGCATTTAACTTTATC 24131 |||||||| || ||||| | ||||| || |||||||||| ||| ||| |||||| ||| Sbjct 44302 ATCATCGTGTGGATCCCAGTGTTTTAAGCCTCCATCACAATGAAAACATCTAACTTGATC 44361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743429053806080