Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq349 289 3e-73 >seq349 Length=550016 Score = 289 bits (320), Expect = 3e-73 Identities = 585/864 (68%), Gaps = 12/864 (1%) Strand=Plus/Minus Query 15904 AGAAAACACATTATCTTTTTTATTTGACATAACTGACATTTTTTGATATTCACTAACTCT 15963 || ||||||||| || || | || ||||| | ||| || || || | ||| | Sbjct 192999 AGTAAACACATTGTCCCCGCTACTCGAAATAACGCCCTCTTTCTGGTACTCGCCGACTTT 192940 Query 15964 CTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAAGGATT 16023 ||| || ||||| || ||||| || || |||||| | ||| ||||| |||||||| Sbjct 192939 CTTCTCGAAGAAGTTAGTTTTGCCATCAGTGGAAATAATGGTCATGAAATCGAAAGGATT 192880 Query 16024 TTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACAAATTC 16083 | || ||| || || || || | ||| | || || || || |||||||| Sbjct 192879 AGTGGAGTTATAAATCTTTTCACAACCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTC 192820 Query 16084 TATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGT 16143 |||||||| ||| | | || |||||||| || | | || || | || || | Sbjct 192819 GATATACTGGCACATGAGCTTGCAATTCATTCCAATGAGGCTTACGGGTAAGGCATCGGA 192760 Query 16144 TAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACACTAT--TT 16201 | ||| | || ||| ||| ||| || || |||||| || || || | || || Sbjct 192759 CAGAAATTCTTGTTCGATAGCAACAGCATCTCGAATTATACCT---ACGACTCGATCCTT 192703 Query 16202 AACGGAGGGTTTAA-TAAGTGTTTA---AACATTATACAAGCAAAATCACAATGCAATCC 16257 | || ||||| || | | | |||| || |||||||| || ||||| || || Sbjct 192702 A---GACGGTTTCTGTACGAGATACGAGAACAGTAGGCAAGCAAAGTCGCAATGTAACCC 192646 Query 16258 TTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTT 16317 ||| || ||| || || || || || ||||| | || ||||||| ||||||||||| Sbjct 192645 TTCATCTCTAGAGATCAATTCATTAGAGAATGTTAAGCCAGGCATTAAGCCTCGTTTTTT 192586 Query 16318 AATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGC 16377 | ||| |||||||| || || ||||| || ||||||||||| || || || || || Sbjct 192585 TAGCCAGAATATAGCCGCGAAGCTGCCAGAGAAAAATATACCTTCTACCGCTGCGAAGGC 192526 Query 16378 AACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaatttgc 16437 | | | || ||| | || ||| | || | |||||| ||| |||||||| || Sbjct 192525 GATGATCCTTTCCCCGAATGTACTACTCTTCGAGTTTATCCAGTTTAAAGCCCAATCAGC 192466 Query 16438 tttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCT 16497 || | |||||| || | |||| || ||||| || | | | ||||| ||| Sbjct 192465 CTTCTTACGAACACAAGGCAGGGTCTCAATAGCATTGAAAAGGAAGTCTTTTTGTTTAGG 192406 Query 16498 ATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGC 16557 ||| ||||||||| || || | | || |||||||||||||| |||||||| || || Sbjct 192405 ATCGGTAATATAAGTTTCGATCAACATGCTGTACATTTCTGAATGGATATTCTCGATAGC 192346 Query 16558 TATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTC 16617 ||| || |||||||||||||| | || || | || || ||||| | || ||||| Sbjct 192345 TATTTGGAAACCATAAAAGCAACGTGCCTCTGTTACCTGAACTTCTTGGCTGAATCTTTC 192286 Query 16618 TGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAAT 16677 | ||| || || || |||||||||||| ||| || |||||||| || | |||| || Sbjct 192285 TACTAGATTCTCATTTACTATTCCATCGGAAGCAGCGAAAAACGCGAGAACGTGTGATAT 192226 Query 16678 AAAAtttttttCGTTATCTGAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGAC 16737 |||| |||||||||| |||||| ||| ||||| | | ||| || |||||||| || Sbjct 192225 GAAATGCCTTTCGTTATCAGAAAGTCTTACCCAGTGATCCATATCCTTAGATAAATCCAC 192166 Query 16738 CTCTTCTACAGTCCAAAAAGAAGC 16761 || ||| |||||||| ||||| Sbjct 192165 TTCCTCTGTGGTCCAAAATGAAGC 192142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462451445616400