Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq339 203 3e-47 >seq339 Length=1584805 Score = 203 bits (224), Expect = 3e-47 Identities = 365/526 (69%), Gaps = 7/526 (1%) Strand=Plus/Minus Query 20043 ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102 |||||| | | ||||| ||| ||||||||||| ||| || |||||||| ||| | || Sbjct 1111950 ATTTCCTCTTCTCACTACAAAAAGGGTATTTTGGCGAGGTGTGGTTGAAGAATTACTTTG 1111891 Query 20103 GTTTATTAAAGGATCAACAAATTCTACCGAGCTT-GT-AGAAAAAGGAGTTAAGATTTGG 20160 |||||| |||| || ||| | || || || ||||||| | || | || ||| Sbjct 1111890 GTTTATCCGAGGAAACACCAATGCCTTTGAACTAAGTCAGAAAAATG--TTCACATATGG 1111833 Query 20161 AGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGAT-TTGACAACCGTCAAGAGGG 20219 ||| | | | | ||||| ||| | | ||| | || | | | | ||||| Sbjct 1111832 GACGCTAACAGTACCAGACAATTCTTAGATT-CGGTGGGTCTTAAGGATAGGGAGGAGGG 1111774 Query 20220 GGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACAT 20279 ||||| || ||| | ||||| || || ||||| |||||||| ||||||||| || || Sbjct 1111773 TGATTTAGGGCCTATTTATGGTTTCCAGTGGAGGCATTTTGGTGCTGAATATAAAGATAT 1111714 Query 20280 GAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAA 20339 | | || |||| |||| | ||||| || ||||||| ||| |||||| Sbjct 1111713 GCATACTGATTACAAAAATAAAGGTATCGATCAGTTGGCTCATGTTATAAATACAATTAA 1111654 Query 20340 AACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTT 20399 ||| | ||||| |||||| | || || | || || ||||| || ||| | ||| Sbjct 1111653 AACAAGACCAAATGACAGACGTATAATAATGTGTGCTTGGAATCCTGTCGATATCCCTGA 1111594 Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 ||||||||| |||||||| ||| || || || || || || || |||| |||| Sbjct 1111593 AATGGCTTTACCTCCATGCCATTGCCTCGTACAGTTCTATGTCGCAAACGATGAGCTGTC 1111534 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||| | |||||| |||| || || ||||| | || || || || ||||||||||| Sbjct 1111533 TTGTCAGTTATATCAAAGATCGGCCGACATGGGTTTAGGAGTACCGTTTAATATTGCAAG 1111474 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACA-GATTTAAA 20564 |||||||||||||| |||||||| |||||||||||| |||| ||| Sbjct 1111473 CTATGCGCTGCTTACTTATATGATAGCACATGTTACAGGATTGAAA 1111428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399133043413930