Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq349 226 3e-54 >seq349 Length=550016 Score = 226 bits (250), Expect = 3e-54 Identities = 501/742 (68%), Gaps = 16/742 (2%) Strand=Plus/Minus Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957 |||||||||||| ||| || || || | ||| | || || |||||||||||||| || Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 13958 TCCAGTG-ATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACA 14016 || |||| | ||| | ||| ||||| || ||||| || || || | | || ||||| Sbjct 192914 TC-AGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACA 192856 Query 14017 ACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACA 14076 ||| ||||| || || || || || | || || ||||| || |||| | | || Sbjct 192855 ACCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCA 192796 Query 14077 ATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACAC 14136 |||||| || || || |||| || | || || | |||||||| ||| |||| || Sbjct 192795 ATTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAAC 192736 Query 14137 AGCCTCGTTTATAATAATCGTAATAATT--TCATTAGAAGGAGGATATTTTAGATGTTTA 14194 ||| || || ||| | || | | || ||||| || | | |||| Sbjct 192735 AGCATCTCGAATTATA--CCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAG 192678 Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254 || | || || ||||| || ||||| | || ||||||||| || | ||| || || Sbjct 192677 AACAGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAG 192618 Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314 |||||||| || ||||| || ||||||||||||| ||| ||||| || ||||| || Sbjct 192617 AATGTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCA 192558 Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374 || || ||||| || || || || || || || || | | ||| || || | | || | Sbjct 192557 GAGAAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATG-TACTACT 192499 Query 14375 TTGTTCGA---TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT 14431 | |||| |||||| ||| |||||| |||| || || || | || || || Sbjct 192498 CT--TCGAGTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTC 192441 Query 14432 TCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGT 14491 ||||||||||| || | || || | ||||| | | ||| || || || || | Sbjct 192440 TCAATAGCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAAC 192381 Query 14492 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTA 14551 | ||| |||||||| || || || || || |||||||| || ||||||||||| || | Sbjct 192380 ATGCTGTACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGT 192321 Query 14552 GCTTCTG--ACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATAC 14609 || |||| ||| || || ||| | |||||||| | | ||| ||||| ||||| | Sbjct 192320 GCCTCTGTTACC--TGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTC 192263 Query 14610 CATCACTAGCTGCAAAAAATGC 14631 |||| ||| || ||||| || Sbjct 192262 CATCGGAAGCAGCGAAAAACGC 192241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482282448902320