Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq339 127 4e-24 >seq339 Length=1584805 Score = 127 bits (140), Expect = 4e-24 Identities = 367/554 (66%), Gaps = 12/554 (2%) Strand=Plus/Minus Query 35177 TCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGAGACGACACTATTCCAGTTCTCACT 35236 || ||||| || | |||||| ||| | || | || ||| | | |||| |||||||| Sbjct 1111994 TCTATTTTCGGGGCGCAAATGCGGTACACTTTACGCGACAATATATTTCCTCTTCTCACT 1111935 Query 35237 ACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAAT 35296 || || | | || ||| |||| || || |||||| | ||||| ||| | || || Sbjct 1111934 ACAAAAAGGGTATTTTGGCGAGGTGTGGTTGAAGAATTACTTTGGTTTATCCGAGGAAAC 1111875 Query 35297 ACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGG 35356 || | ||| ||| | |||| || | ||||| ||| ||||||| | | | Sbjct 1111874 ACCAATGCCTTTGAACTAAGTCAGAAAAATGTTCACATATGGGACGCTAACAGTACCAGA 1111815 Query 35357 GAATTTTTGGA--CAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTAT 35414 |||| || || | || | | ||| | ||||| | ||||| ||||| || || | | Sbjct 1111814 CAATTCTTAGATTCGGTGG-GTCTTA-AGGATAGGGAGGAGGGTGATTTAGGGCCTATTT 1111757 Query 35415 ACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTC-TTCCGATTATACT 35473 | || ||||| ||| | |||||||||||||||||| | | | | | | | ||||| | Sbjct 1111756 ATGGTTTCCAGTGGAGGCATTTTGGTGCTGAATAT-AAAGATATGCATACTGATTACAAA 1111698 Query 35474 GGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGAT 35533 || ||||| ||||| ||||| || | |||| || | | | || ||| |||| Sbjct 1111697 AATAAAGGTATCGATCAGTTGGCTCATGTTATAAATACAATTAAAACAAGACCAAATGAC 1111638 Query 35534 AGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCA 35593 ||| | || || ||| || ||||||||| | ||| | | |||||| | |||||| Sbjct 1111637 AGACGTATAATAATGTGTGCTTGGAATCCTGTCGATATCCCTGAAATGGCTTTACCTCCA 1111578 Query 35594 TGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCA 35652 ||||| || || | || || ||||| || || | || |||| || ||||| ||||| Sbjct 1111577 TGCCA-TTGCCTCGTACAGTTCTATGTCGCAAACGATGAGCTGTCTTGTCAGTTATATCA 1111519 Query 35653 GCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTG 35710 || || || ||| || || || || || || ||||||||| || | || || Sbjct 1111518 AAGATCGGCCGACATG--GGTTTAGGAGTACCGTTTAATATTGCAAGCTATGCGCTGCTT 1111461 Query 35711 ACTCATCTGATGGC 35724 ||| || |||| || Sbjct 1111460 ACTTATATGATAGC 1111447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989451199682670