Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1096 360 2e-94 seq349 315 9e-81 >seq1096 Length=295351 Score = 360 bits (398), Expect = 2e-94 Identities = 1205/1862 (65%), Gaps = 39/1862 (2%) Strand=Plus/Minus Query 62037 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62096 ||||||| || || || || || || |||||||| || | | ||||||||| || Sbjct 68969 TTGTCCACGGTAAACTGGATCGGTTTGGCAGCGGGTTTTGTTCTCAAATAGTACATGCCT 68910 Query 62097 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62156 || || || || | ||| ||||| || ||||| || || ||| | || Sbjct 68909 GTCTTAAGCCCCTTGCGCCAGCCGTAGAAGTGCATCGACGAGAGGACACCATATGTTGGT 68850 Query 62157 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62216 | | | | || || |||| | ||||| ||||| |||||||| || | || || ||| Sbjct 68849 TTTTCGACGTGAATGTTCAAACTCTGACTCTGATCAATGAAGGCCCCACGATCGGCGGCC 68790 Query 62217 ATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTA-ATATC 62275 || || | |||| || || | ||| ||||| | || || |||| | |||| | || Sbjct 68789 ATATTGAGGATCACTTTCTGCGAAATCTCCCAGACCGTCTTGTAAA-TAGCTTTGAGGTC 68731 Query 62276 TTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGAT 62332 ||| |||| | | ||||| || || || | | | | || ||| || || Sbjct 68730 TTCAGGAATATCAGGGACGTTCTGGATAGAACCGCAGTTGGCTAAGATTTGATTTTTCAT 68671 Query 62333 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTG 62392 | |||| ||| | || ||| || || || | || | ||| |||| |||| ||| Sbjct 68670 CGTTTCATCCCACAGGCCTCGCTCTGTCAAGTCTTTGAGCAAATGGTGGTTGACTATTTG 68611 Query 62393 GAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTC 62452 |||||| || || || || | || |||||||| || ||| || ||||| | || || Sbjct 68610 GAATTCGCCCGATAAGACCCGACGGGTGTAAATGTTTGAGGTGTAAGGTTCAATGGATTC 68551 Query 62453 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62512 ||| ||||| | || |||||||| || || |||||||||||||| | | || || Sbjct 68550 ATTGTTTCCAAGGATCTGAGCAGTGGAAGCTGTCGGCATAGGTGCTAAAAGTAGCGAGTT 68491 Query 62513 TCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG 62572 |||| |||| | | || || ||||| || | |||||| |||||| | || Sbjct 68490 CCTAACGCCGTGTTTCGCTATCTTTTCTTTCAGTGCTGCCCAATCCCAAAGGCTGGTAGG 68431 Query 62573 TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCG----TACGATCCTACAT 62628 ||| ||| |||| || || || || || ||| || || | Sbjct 68430 CGTAACGTCCCACATGTCATACTGTAAGATCCCTTTGCTAACGGGACTACCATTGTA-AG 68372 Query 62629 ATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAAT 62688 | | || | || | || |||| |||| || |||||| || || | ||| | || | Sbjct 68371 ACGAATAAG-TGCCCTTTTGTTCT--GCTATTTCACAACTTGCTTCGAGCGCAGCATAGT 68315 Query 62689 AAATGGTTTCAAAGATCTTCTTATTTAG--ATCTTGTGCTTCCGGGCTATCAAATGGATA 62746 |||| || || || |||| ||||| || | |||| |||| ||| ||||| || Sbjct 68314 AAATCGTCTCGAATATCTGTTTATTGAGCAAACTTG--CTTCTTCGCTGTCAAAAGGCAT 68257 Query 62747 ATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62806 || ||| || || || || ||||| ||||| || || || || || ||||| || | Sbjct 68256 CCGTAGGAGTATGAATGCATCTGCTAAACCTTGTACCCCGATTCCTATGGGTCTGTGGCG 68197 Query 62807 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62866 |||| || |||| ||||| || |||||| || || | ||||| ||||||| ||| Sbjct 68196 ACTATTTGAATTTTCCGCTTCCTTAACAGGATAGTAGTTCACGTCTATTATTTTATCGAG 68137 Query 62867 ATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATC 62923 ||||| | || |||| | || |||| | ||| || | | || || Sbjct 68136 GTTTCTCGTTACTAATTTGGTGATGTCTTTCAACATATCAAAGTCGTAAGTTTTCCTGTC 68077 Query 62924 TA---TTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGC 62980 | || ||||| || | || | || || | ||| || || || | || | | Sbjct 68076 GGCCTTGACGAACATATTGACGGCTATCGAAGCTAAATTGCATACTGCGATTTCGTCCGG 68017 Query 62981 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 63040 | ||||| || || || ||||| | |||||||| ||||| || || | ||| || Sbjct 68016 TGAAGTATATTCGATGATTTCCGTGCATAAATTACTACTTTTGATGGTACCAAGATTCTG 67957 Query 63041 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63100 ||| || |||||| | ||||| ||||| || || | || | ||||| |||||||||| Sbjct 67956 TTGGTTGCTCTTTCTATTACAGGCATCTTTGTACAACATATAAGGAGTGCCAGTTTCAAC 67897 Query 63101 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA--TAGATTTGTATCTC 63158 || ||| | ||||| |||||||| | | | ||| | || | | ||| | || | Sbjct 67896 TTGGGATACAATAATAGCTTTCCAAAGTTCCCTAGCTTGTACTTGTTTGATGTAATTCCC 67837 Query 63159 CT--TTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63216 || ||||| | | | | | || | | || || || ||||||||| || | | Sbjct 67836 CTCATTCTCATACTTCTCG----TAGAGTTTCTCAAATTCTTCTCCCCAACAATCGGAAA 67781 Query 63217 ATCTAGGA--CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63274 | ||| ||| | |||||||| | ||||| | || | | |||||||| Sbjct 67780 GACCCGGAGCCATG--TGAGGACACATAAGAGACCAAACACCATTTGAATCTACTCGTTT 67723 Query 63275 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTT 63334 ||| || | ||| || ||||| | || ||||| |||||||| || | ||| || || Sbjct 67722 CATGAACAAATCTGGGATCCACAATGCATAAAATAAATCTCTTGCTCGGTATTCTTCCTT 67663 Query 63335 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63394 || || ||||| || | || |||||| | | | ||||| |||||||||||| ||||| Sbjct 67662 GCCAGTGTTCTTCTTTAAATTAAGGAACTCGAAGACATCAGCATGCCACGGTTCTAAGTA 67603 Query 63395 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63454 ||| || | |||| || ||||| || ||||| || || | || || || ||| |||| Sbjct 67602 TATTGCAAACGCTCCTGGTCGTTTATTGCCTCCTTGGTCGACATACCTTGCCGTGCTATT 67543 Query 63455 ATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCC 63514 | |||| ||| ||| || | | |||||| || | ||| || || || | ||||| Sbjct 67542 AAAAACCTTCAGCATAGGTACTAGACCGTTCGACACACCGTTAGTGCCTGCAATATATGT 67483 Query 63515 TCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63572 ||| |||| | ||||| || ||| | ||| || || || || ||||| || Sbjct 67482 TCCTTTGGCTCTGATATTGTGAACGTTG--ACACCAATACCTCCCGCTGACTTAGAAATA 67425 Query 63573 AATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGT 63632 | |||||| | | || | || || || || ||||| || ||| | || Sbjct 67424 TAAGCGCATTGCGCCAGGCAGTTGAAAATACCCTCAATACTATCGTCTGGCATCATTAGA 67365 Query 63633 AGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63692 |||||||| ||||| ||| | | | ||| ||||| |||||| || ||| ||| Sbjct 67364 AGAAAACAAGAAGACAATTGAGGTCTGGGAGTACCCGCGGAAAATAAAGTTGGACTTGCG 67305 Query 63693 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63752 || || || || |||| || | | ||| || || || ||||| | |||||| || Sbjct 67304 TGTGTGAAATATCTTTCCGATAACAAATTATAAGTTTCTATAGCGGCGTCTATGTCTTCC 67245 Query 63753 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTG 63812 ||||||||| || ||||| | ||| | |||||||||||| | ||||||||| || | Sbjct 67244 CCATGAATTCCCACAGCGACTCTCATGAGCATGTGCTGAGGGCGTTCAACAATCTTCCCG 67185 Query 63813 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63872 || ||||| | || ||||| || | |||||| ||||| || || ||||| || ||| Sbjct 67184 TTGATTTTGAGCAGATAGGAACGCTCAAGAGTTTTGAAACCGAAGTAATTGTAGGAGAAG 67125 Query 63873 TC 63874 || Sbjct 67124 TC 67123 >seq349 Length=550016 Score = 315 bits (348), Expect = 9e-81 Identities = 605/890 (68%), Gaps = 3/890 (0%) Strand=Plus/Minus Query 33276 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 33335 || ||||| ||| ||| ||||| || || || || ||||| || |||||||| || Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 33336 TCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAAT 33395 || || ||| | ||||||||| || ||||| || || ||||| |||| | | Sbjct 192914 TCAGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAA 192855 Query 33396 CCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33455 || | ||||| || ||| || || ||||| ||||| ||||| ||| | | ||| Sbjct 192854 CCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAA 192795 Query 33456 TTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACC 33515 |||||||| ||||| | || || | || | | |||||||||||||| || | || Sbjct 192794 TTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACA 192735 Query 33516 GCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575 |||| | || ||| | || || | | |||| |||| | || ||| Sbjct 192734 GCATCTCGAATTATACCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAGAAC 192675 Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635 | | || || || ||||| || | || || |||||| || ||||| ||||| || Sbjct 192674 AGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAAT 192615 Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695 || | || ||||||| ||| || ||||| ||||| ||||| | ||||| || || Sbjct 192614 GTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAG 192555 Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCTGT 33753 || || || |||||||| || || ||||| || | || || || || | | || Sbjct 192554 AAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTC 192495 Query 33754 CA-TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33812 | | |||||| ||| ||||||||| |||||||| |||||||||| || || || Sbjct 192494 GAGTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCAATA 192435 Query 33813 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 33872 ||||| || || ||| ||||| ||| ||| ||| |||||| |||||||| | || Sbjct 192434 GCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAACATGCTG 192375 Query 33873 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33932 |||||||| ||||| || || || || || || || || || || || || | ||||| Sbjct 192374 TACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGCCTCT 192315 Query 33933 GTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTG 33992 || | ||| |||||| | |||| |||| ||| ||| ||||| ||||||||||| Sbjct 192314 GTTACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATCGGAA 192255 Query 33993 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTC 34052 || || |||||||| | || ||| ||| |||| |||||| | ||| | | Sbjct 192254 GCAGCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAGAAAGTCTTACC 192195 Query 34053 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 34112 || | || ||||| ||||||| ||||||||| || ||||||||||| || || || Sbjct 192194 CAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAGCTTCGGCT 192135 Query 34113 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 | ||| || | ||| || || | || ||||| ||||| |||||||| Sbjct 192134 TCTTTGTATTTGGCCCAAATATCGGGGTACTGGATGGGGAATATAACAAA 192085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629735141130720