Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1096 291 8e-74 seq349 279 5e-70 seq17 114 1e-20 >seq1096 Length=295351 Score = 291 bits (322), Expect = 8e-74 Identities = 909/1388 (65%), Gaps = 36/1388 (3%) Strand=Plus/Minus Query 37183 GTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATT 37242 || || ||||||||||| ||||| || | | || |||| || || || || ||||| Sbjct 68570 GTGTAAGGTTCAATGGATTCATTGTTTCCAAGGATCTGAGCAGTGGAAGCTGTCGGCATA 68511 Query 37243 GGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTC 37302 ||||||| || || || || | || ||| | || | | ||| ||| | | Sbjct 68510 GGTGCTAAAAGTAGCGAGTTCCTAACGCCGTGTTTCGCTATCTTTTCTTTCAGTGCTGCC 68451 Query 37303 CAATCCCATAAATCTGTTGGGTTCTTTAA---CCACATATCATATTGTAGAATACCTTTA 37359 |||||||| || ||| | || | | | |||||| ||||| |||| || ||||| Sbjct 68450 CAATCCCA-AAGGCTGGTAGG--CGTAACGTCCCACATGTCATACTGTAAGATCCCTTTG 68394 Query 37360 CTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTA 37419 || | ||| | | || || | | ||||| || | || |||| ||| ||||| Sbjct 68393 CTAACGGGACTACCATTGTAAGACGAATAAGTGCCCTTTTGTTCTGCTATTTCACAACTT 68334 Query 37420 GATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCT 37479 | ||| || || ||||| || || || ||||| || ||| |||| | | |||||||| Sbjct 68333 GCTTCGAGCGCAGCATAGTAAATCGTCTCGAATATCTGTTTATTGAGCAAACTTGCTTCT 68274 Query 37480 TCGCTATCGAATG-CATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGAT 37538 ||||| || || | ||| | | | ||| || |||| || ||||| || || ||||| Sbjct 68273 TCGCTGTCAAAAGGCATC-CGTAGGAGTATGAATGCATCTGCTAAACCTTGTACCCCGAT 68215 Query 37539 ACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGAT 37598 ||||||||||| || |||| || | || ||| | || ||||| || || | Sbjct 68214 TCCTATGGGTCTGTGGCGACTATTTGAATTTTCCGCTTCCTTAACAGGATAGTAGTTCAC 68155 Query 37599 ATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA 37658 ||||||||||||| || ||| | || || ||| || || | ||||| | || || Sbjct 68154 GTCTATTATTTTATCGAGGTTTCTCGTTACTAATTTGGTGATGTCTTTCAACATATCAAA 68095 Query 37659 --CATAAATAC----GTTATTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACA 37712 | ||| | || || || || || | | | || || ||| ||| || Sbjct 68094 GTCGTAAGTTTTCCTGTCGGCCTTGACGAACATATTGACGGCTATCGAAGCTAAATTGCA 68035 Query 37713 TACAGCAACTTCATCTTCGTT--ACTAAATTGTATAATCTCTGTACAGAGATTACTCGAT 37770 ||| || | ||| || || | | || ||| || || || || || | |||||| | Sbjct 68034 TACTGCGATTTCGTC--CGGTGAAGTATATTCGATGATTTCCGTGCATAAATTACTACTT 67977 Query 37771 CTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATA 37830 | || || || | ||| ||| ||| ||| ||||||| | |||||| || | ||| Sbjct 67976 TTGATGGTACCAAGATTCTGTTGGTTGCTCTTTCTATTACAGGCATCTTTGTACAACATA 67917 Query 37831 TACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTC--TTGCTT 37888 || || || || ||| | ||| | | ||||||| |||||| || ||| | |||| Sbjct 67916 TAAGGAGTGCCAGTTTCAACTTGGGATACAATAATAGCTTTCCA--AAGTTCCCTAGCTT 67859 Query 37889 TAAC--GATCGCTTTAAtttttttCTTTGTTTCGTA-TTCTATATATAATTTGTTAAAAT 37945 || | | | | ||||| || || | | || |||| || | ||| | ||| | Sbjct 67858 GTACTTGTTTGATGTAATTCCCCTCATTCT--CATACTTCTCG-TAGAGTTTCTCAAATT 67802 Query 37946 CATTCCCCCATACATCGCATAATCCTGGA--CATTCGCATGGACACATTAGAGACCATTC 38003 | | ||||| |||| | | || ||| ||| | |||||||| |||||||| | Sbjct 67801 CTTCTCCCCAACAATCGGAAAGACCCGGAGCCATGTGA--GGACACATAAGAGACCAAAC 67744 Query 38004 TTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATC 38063 ||| | ||||| |||| ||| || ||||| || | ||| |||||| ||||||||| Sbjct 67743 ACCATTTGAATCTACTCGTTTCATGAACAAATCTGGGATCCACAATGCATAAAATAAATC 67684 Query 38064 TTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATC 38123 | | | || |||||||| || || ||||| |||| | || || ||||| | ||| Sbjct 67683 TCTTGCTCGGTATTCTTCCTTGCCAGTGTTCTTCTTTAAATTAAGGAACTCGAAGACATC 67624 Query 38124 AGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATT 38183 ||| ||||| ||||||| || || | | |||||||||| ||||| ||||| || | Sbjct 67623 AGCATGCCACGGTTCTAAGTATATTGCAAACGCTCCTGGTCGTTTATTGCCTCCTTGGTC 67564 Query 38184 AATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCC 38243 | ||| || | ||| ||||| | | | | ||||||||||| ||| || || || Sbjct 67563 GACATACCTTGCCGTGCTATTAAAAACCTTCAGCATAGGTACTAGACCGTTCGACACACC 67504 Query 38244 GTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTA--TCGACAATCCTATT 38301 ||| | || | ||||| || || || |||| ||||| | | |||| || || Sbjct 67503 GTTAGTGCCTGCAATATATGTTCCTTTGGCTCTGATATTGTGAACGTTGACA--CCAATA 67446 Query 38302 CCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATA 38361 || || || || || || |||||||||| | | || ||||| || ||| Sbjct 67445 CCTCCCGCTGACTTAGAAATATAAGCGCATTGCGCCAGGCAGTTGAAAATACCCTCAATA 67386 Query 38362 CTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCG 38421 || || || || ||| | ||||||| ||||| |||||| ||||| || ||| Sbjct 67385 CTATCGTCTGGCATCATTAGAAGAAAACAAGAAGACAATTGAGGTCTGGGAGTACCCGCG 67326 Query 38422 TTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCT 38481 |||||| || ||| ||| ||| |||| || ||||||| || ||||||| |||||| Sbjct 67325 GAAAATAAAGTTGGACTTGCGTGTGTGAAATATCTTTCCGATAACAAATTATAAGTTTCT 67266 Query 38482 ATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGT 38541 || | | ||||| || | || ||||| || | || || ||||| ||||| || || Sbjct 67265 ATAGCGGCGTCTATGTCTTCCCCATGAATTCCCACAGCGACTCTCATGAGCATGTGCTGA 67206 Query 38542 GGTCTTTC 38549 || | ||| Sbjct 67205 GGGCGTTC 67198 >seq349 Length=550016 Score = 279 bits (308), Expect = 5e-70 Identities = 568/836 (68%), Gaps = 21/836 (3%) Strand=Plus/Minus Query 11435 TTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATT 11494 ||||||||||| | || || | || || || ||||| ||||| |||||||| |||| Sbjct 192863 TTTTCACAACCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATG 192804 Query 11495 AAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCT 11554 | |||||||| || || || || || | ||| | | || ||| || | ||| Sbjct 192803 AGCTTGCAATTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCG 192744 Query 11555 ATATTAACCGCATCAATGATTATCGACGTTATAACT---TCCTTAGATGGTGGATGTAAT 11611 ||| ||| ||||| ||||| || | | ||| |||||||| ||| |||| Sbjct 192743 ATAGCAACAGCATCTCGAATTAT--ACCT-ACGACTCGATCCTTAGACGGTTTCTGTACG 192687 Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671 | || |||| || || ||||| || |||||||| ||||| |||||| || | | Sbjct 192686 AGATACGAGAACAGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAAT 192627 Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731 |||||||| |||||||| || ||||| || ||||||||||||| ||| |||||||| || Sbjct 192626 TCATTAGAGAATGTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCG 192567 Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC--AT 11789 || ||||| || ||||| || || || ||||| || || | | ||||| || || Sbjct 192566 AAGCTGCCAGAGAAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAAT 192507 Query 11790 ATACCTTGTTGCTAGAT-ATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC 11848 ||| | | || | ||||| ||| ||||||||||| ||||| || || | Sbjct 192506 GTACTACTCTTCGAGTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGC 192447 Query 11849 ATTGTTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTAT 11906 | || || ||||| || || | || | ||||| | || ||| | | ||| || | Sbjct 192446 AGGGTCTCAATAGCATTGAAAAGGAAGTC--TTTTTGTTTAGGATCGGTAATATAAGTTT 192389 Query 11907 CTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGA 11966 | || || | || |||||||||||||| ||||| || ||||||||||| || ||||| | Sbjct 192388 CGATCAACATGCTGTACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAA 192329 Query 11967 AACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTA 12026 | || |||||||||| ||| || || |||||||| ||| ||||||||||| Sbjct 192328 AGCAACGTGCCTCTGTTACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTA 192269 Query 12027 CAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTT 12086 | || ||||| || || ||||| || || | ||| ||| || | |||||| | Sbjct 192268 CTATTCCATCGGAAGCAGCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGTTAT 192209 Query 12087 TAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAA 12146 || | | | |||| | ||| | ||| || |||||||| ||||| || |||||||| Sbjct 192208 CAGAAAGTCTTACCCAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAA 192149 Query 12147 AACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAA 12206 | || | | || ||| || | ||| ||||| | |||| || ||||| |||| Sbjct 192148 ATGAAGCTTCGGCTTCTTTGTATTTGGCCCAAATATCGGGGTACTGGATGGGGAATATAA 192089 Query 12207 CGAA----CCTAGAATCAGACTCTTGAAGAATAGGCTCCATTCGTGTATAAAAATC 12258 | || ||| | | ||||| ||||| |||||| | | || || |||||| Sbjct 192088 CAAAGCGTCCTGGGTT----CTCTTTAAGAAGAGGCTCTAGTTCTGGATCAAAATC 192037 >seq17 Length=2144227 Score = 114 bits (126), Expect = 1e-20 Identities = 309/464 (67%), Gaps = 13/464 (3%) Strand=Plus/Plus Query 120289 TGGTTGAAAATAAAGAAGGATTATATACTAAATGGATCTATAGCGGATTCCGTTGATTTA 120348 |||||||| | || ||||| || | | ||| | || |||||| | | |||||| Sbjct 1931341 TGGTTGAAGGTGAAAAAGGACTACCTCTTCGGTGGGGCGATGGCGGATACAGCAGATTTA 1931400 Query 120349 GTTGTGTTAGGATCATACTATGGAAAAGGGTCAAGG--GGCGGCATTCAATCAATATTCT 120406 | || ||||| | | ||||||| ||| |||| || || || || | |||| Sbjct 1931401 ATCGTTTTAGGGGCTTGGTATGGAACAGG--CAAGAAAGGAGGAATGATGTCCGTTTTCT 1931458 Query 120407 TAATGGGATGTTACGATCCCAACGATTGTAAATGGAAAACGGTTACAAAATGTTCA---- 120462 | ||||| || ||| |||| ||| || |||| || ||||| ||| || || Sbjct 1931459 TGATGGGTTGCTACAATCCGAACAATAAAAAATTCTGCACCGTTACCAAA-GTCCACACT 1931517 Query 120463 GGTCATGATGAAGAAACTCTAAAACAAATACAAGAGGAACTAGATGTTATTAAAATCAGT 120522 |||||||| || ||||||| | || ||||| |||||| || | | ||||||||| Sbjct 1931518 GGTCATGACGATAAAACTCTTGAGAAATTACAAACGGAACTTGACATGGTAAAAATCAGT 1931577 Query 120523 AAGGATGCATCGAAAATACCTAAGTGGTTAACTATAAATAAAGCATATTAT-CCTGATTT 120581 |||| || ||| | || ||||||| | | | ||| || | || ||||| Sbjct 1931578 CAGGACATGTCAAAAGTGCCAGGTTGGTTAAAT-TGCACCAAGACGATGGTGCCGGATTT 1931636 Query 120582 TATTGTTAAAGATCCTAGATCTTCCCCGGTATGGGAAATTACGGGATCTGGTTTTACATC 120641 | | | || ||| |||| | | || ||||||||||| |||||| | | || ||| | Sbjct 1931637 TGTCGCTAGAGACCCTAAAAATCAACCTGTATGGGAAATCACGGGAGCAGAGTTCACA-C 1931695 Query 120642 TTCAAG-TCAACATACAGCAAATGGAATATCTATACGTTTTCCTAGATTTGCAAGAATAA 120700 || | | ||||| || ||||||| ||||| | ||||| ||| || |||| || | Sbjct 1931696 AGCACGATGTTCATACGGCGGATGGAATTTCTATCAGGTTTCCAAGAGTTACAAGGATTA 1931755 Query 120701 GAAATGATAAAAATTGGATATCTGCAACAAATCTACAAGAGTTG 120744 | | |||||| | |||| ||| || || ||||| ||||| ||| Sbjct 1931756 GGGACGATAAAGACTGGAAATCGGCCACGAATCTGCAAGAATTG 1931799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468463458390560