Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1096 358 9e-94 seq349 324 2e-83 >seq1096 Length=295351 Score = 358 bits (396), Expect = 9e-94 Identities = 1221/1889 (65%), Gaps = 39/1889 (2%) Strand=Plus/Minus Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 64889 ||||||| || || || || || || |||||||| || | | ||||||||| || Sbjct 68969 TTGTCCACGGTAAACTGGATCGGTTTGGCAGCGGGTTTTGTTCTCAAATAGTACATGCCT 68910 Query 64890 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 64949 || || || || | ||| ||||| || ||||| || || ||| | || Sbjct 68909 GTCTTAAGCCCCTTGCGCCAGCCGTAGAAGTGCATCGACGAGAGGACACCATATGTTGGT 68850 Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009 | | | | || || |||| | ||||| ||||| |||||||| || | || || ||| Sbjct 68849 TTTTCGACGTGAATGTTCAAACTCTGACTCTGATCAATGAAGGCCCCACGATCGGCGGCC 68790 Query 65010 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTA-ATATC 65068 || || | |||| || || | ||| ||||| | || || |||| | |||| | || Sbjct 68789 ATATTGAGGATCACTTTCTGCGAAATCTCCCAGACCGTCTTGTAAA-TAGCTTTGAGGTC 68731 Query 65069 TTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 65125 ||| |||| | | ||||| || || || | | || | || ||| || || Sbjct 68730 TTCAGGAATATCAGGGACGTTCTGGATAGAACCGCAGTTGGCTAAGATTTGATTTTTCAT 68671 Query 65126 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 65185 | |||| ||| | || ||| || || || | || | ||| | || |||| ||| Sbjct 68670 CGTTTCATCCCACAGGCCTCGCTCTGTCAAGTCTTTGAGCAAATGGTGGTTGACTATTTG 68611 Query 65186 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 65245 ||||| || || || || | || |||||||| || ||| || ||||| | || || Sbjct 68610 GAATTCGCCCGATAAGACCCGACGGGTGTAAATGTTTGAGGTGTAAGGTTCAATGGATTC 68551 Query 65246 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 65305 ||| ||||| | || |||||||| || || |||||||||||||| | | || || Sbjct 68550 ATTGTTTCCAAGGATCTGAGCAGTGGAAGCTGTCGGCATAGGTGCTAAAAGTAGCGAGTT 68491 Query 65306 TCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG 65365 |||| |||| | | || || ||||| || | | |||||| |||||| | || Sbjct 68490 CCTAACGCCGTGTTTCGCTATCTTTTCTTTCAGTGCTGCCCAATCCCAAAGGCTGGTAGG 68431 Query 65366 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 65425 ||| |||| || || || || || || |||| ||| Sbjct 68430 CGTAACGTCCCACATGTCATACTGTAAGATCCCTTTGCTAACGG--GA--CTACCATTGT 68375 Query 65426 AT--CGTATG-GT-CCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 65481 | || || || || | | || |||| ||||||||| || || | ||| | || | Sbjct 68374 AAGACGAATAAGTGCCCTTTTGTTCTGCTATTTCACAACTTGCTTCGAGCGCAGCATAGT 68315 Query 65482 AAATGGTTTCGAAGATCTTCTTATTTAG--ATCTTGTGCTTCCAGGCTATCAAATGGATA 65539 |||| || ||||| |||| ||||| || | |||| |||| ||| ||||| || Sbjct 68314 AAATCGTCTCGAATATCTGTTTATTGAGCAAACTTG--CTTCTTCGCTGTCAAAAGGCAT 68257 Query 65540 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 65599 || ||| || || || |||||||| ||||| || || || || || ||||| || | Sbjct 68256 CCGTAGGAGTATGAATGCATCTGCTAAACCTTGTACCCCGATTCCTATGGGTCTGTGGCG 68197 Query 65600 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 65659 |||| || |||| ||||| || |||||| || || | ||||| ||||||| ||| Sbjct 68196 ACTATTTGAATTTTCCGCTTCCTTAACAGGATAGTAGTTCACGTCTATTATTTTATCGAG 68137 Query 65660 ATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC--AAAT----CGCTC 65713 ||||| | || |||| | || |||| | ||| || || | | || Sbjct 68136 GTTTCTCGTTACTAATTTGGTGATGTCTTTCAACATATCAAAGTCGTAAGTTTTCCTGTC 68077 Query 65714 ATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 65773 | | || ||||| || | || | || || | ||| || || || | || | | Sbjct 68076 GGCCTTGACGAACATATTGACGGCTATCGAAGCTAAATTGCATACTGCGATTTCGTCCGG 68017 Query 65774 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 65833 | ||||| || || || ||||| | |||||||| |||||||| || | ||| || Sbjct 68016 TGAAGTATATTCGATGATTTCCGTGCATAAATTACTACTTTTGATGGTACCAAGATTCTG 67957 Query 65834 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 65893 ||| || |||||| | ||||| ||||| || || | || | ||||| |||||||||| Sbjct 67956 TTGGTTGCTCTTTCTATTACAGGCATCTTTGTACAACATATAAGGAGTGCCAGTTTCAAC 67897 Query 65894 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA--TAGATTTGTATCTC 65951 || ||| | ||||| |||||||| | | | ||| | || | | ||| | || | Sbjct 67896 TTGGGATACAATAATAGCTTTCCAAAGTTCCCTAGCTTGTACTTGTTTGATGTAATTCCC 67837 Query 65952 TT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 66009 | ||||| | | | | || | | | || || || ||||||||| || | | Sbjct 67836 CTCATTCTCATACTTCTCGT----AGAGTTTCTCAAATTCTTCTCCCCAACAATCGGAAA 67781 Query 66010 ATCCAGGA--CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 66067 || ||| ||| | |||||||| | ||||| | || | | |||||||| Sbjct 67780 GACCCGGAGCCATG--TGAGGACACATAAGAGACCAAACACCATTTGAATCTACTCGTTT 67723 Query 66068 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTT 66127 ||| || | ||| || ||||| | || |||||||||||| | || | ||| || || Sbjct 67722 CATGAACAAATCTGGGATCCACAATGCATAAAATAAATCTCTTGCTCGGTATTCTTCCTT 67663 Query 66128 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTA 66187 || || ||||| || | || |||||| | | | |||| |||||||||||| ||||| Sbjct 67662 GCCAGTGTTCTTCTTTAAATTAAGGAACTCGAAGACATCAGCATGCCACGGTTCTAAGTA 67603 Query 66188 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 66247 ||| || | |||| || ||||| || ||||| || || | || || || ||| |||| Sbjct 67602 TATTGCAAACGCTCCTGGTCGTTTATTGCCTCCTTGGTCGACATACCTTGCCGTGCTATT 67543 Query 66248 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 66307 | |||| ||| ||| || | | ||| || || ||| || || || | ||||| | Sbjct 67542 AAAAACCTTCAGCATAGGTACTAGACCGTTCGACACACCGTTAGTGCCTGCAATATATGT 67483 Query 66308 TCCACTTGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 66365 ||| | || | ||||| || |||| | || || || || || ||||| || Sbjct 67482 TCCTTTGGCTCTGATATTGTGAACGTTGACA--CCAATACCTCCCGCTGACTTAGAAATA 67425 Query 66366 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 66425 | |||||| | | | | || ||||| |||||||| || ||| | || Sbjct 67424 TAAGCGCATTGCGCCAGGCAGTTGAAAATACCCTCAATACTATCGTCTGGCATCATTAGA 67365 Query 66426 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 66485 |||||||| ||||| ||| | | ||| ||||| |||||| || ||| ||| Sbjct 67364 AGAAAACAAGAAGACAATTGAGGTCTGGGAGTACCCGCGGAAAATAAAGTTGGACTTGCG 67305 Query 66486 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 66545 || || || || |||| || | | ||| || || || ||||| | |||||| || Sbjct 67304 TGTGTGAAATATCTTTCCGATAACAAATTATAAGTTTCTATAGCGGCGTCTATGTCTTCC 67245 Query 66546 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 66605 ||||||||| || ||||| | ||| | |||||||||||| | |||||| ||||| | Sbjct 67244 CCATGAATTCCCACAGCGACTCTCATGAGCATGTGCTGAGGGCGTTCAACAATCTTCCCG 67185 Query 66606 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 66665 || ||||| | || ||||| || | |||||| ||||| || || ||||| || ||| Sbjct 67184 TTGATTTTGAGCAGATAGGAACGCTCAAGAGTTTTGAAACCGAAGTAATTGTAGGAGAAG 67125 Query 66666 TCTCGTTCGTAAATAATAACCGAGTTGAG 66694 || | || || || || |||||||| Sbjct 67124 TCCCTGTCATATATGATGCATGAGTTGAG 67096 >seq349 Length=550016 Score = 324 bits (358), Expect = 2e-83 Identities = 607/890 (68%), Gaps = 3/890 (0%) Strand=Plus/Minus Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911 || ||||| ||| ||| ||||| || || || || ||||| || |||||||| || Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971 || || ||| | |||||||||||| ||||| | |||||||| |||| | | Sbjct 192914 TCAGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAA 192855 Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031 || | ||||| || ||| || || ||||||||||| ||||| ||| | | ||| Sbjct 192854 CCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAA 192795 Query 36032 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 36091 |||||||| || || | || || | || | | |||||||||||||| |||| || Sbjct 192794 TTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACA 192735 Query 36092 GCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 36151 || ||| || ||| || ||| || | | |||| | | | || ||| Sbjct 192734 GCATCTCGAATTATACCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAGAAC 192675 Query 36152 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 36211 | | || || || ||||| |||| || || |||||| || ||||| || || || Sbjct 192674 AGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAAT 192615 Query 36212 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 36271 || | || ||||||| ||| || ||||| ||||| ||||| | ||| || ||||| Sbjct 192614 GTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAG 192555 Query 36272 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCACTGT 36329 || || || |||||||| || || ||||| || | || || || || | | || Sbjct 192554 AAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTC 192495 Query 36330 CA-TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 36388 | | |||||| ||| ||||||||| |||||||| |||||||||| ||||| ||| Sbjct 192494 GAGTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCAATA 192435 Query 36389 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 36448 ||||| || || ||| ||||| ||| ||| ||| ||| || || ||||| | || Sbjct 192434 GCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAACATGCTG 192375 Query 36449 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 36508 |||||||| ||||| || || || || || ||||| || || || || || | ||||| Sbjct 192374 TACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGCCTCT 192315 Query 36509 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 36568 || | ||| |||||| | |||| |||| ||| ||| ||||| |||||||| || Sbjct 192314 GTTACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATCGGAA 192255 Query 36569 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTC 36628 || || |||||||| | || ||| ||| |||| ||||||| | ||| | | Sbjct 192254 GCAGCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAGAAAGTCTTACC 192195 Query 36629 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 36688 || | || ||||| ||||||| ||||||||| || ||||||||||| || || || Sbjct 192194 CAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAGCTTCGGCT 192135 Query 36689 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | ||| || | ||| || || | || || || || || |||||||| Sbjct 192134 TCTTTGTATTTGGCCCAAATATCGGGGTACTGGATGGGGAATATAACAAA 192085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658086628726160