Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq747 129 6e-25 seq38 118 1e-21 seq365 109 5e-19 >seq747 Length=644639 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| |||||||| || ||||||| |||||||| || || ||||| || || | Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 453102 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | ||||| || ||||||||||| ||||||||||||||||||| ||||| Sbjct 453101 AATGTACGTCCA-TCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGG 453043 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || |||||||| |||||| ||| | | ||| | || || | || || || Sbjct 453042 AATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGAC 452983 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | || || || || | ||||| ||||| |||||||| Sbjct 452982 CTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCAT 452935 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| | || || ||||| ||||||| || || || ||||| || || || || Sbjct 465967 GCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGA 466026 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 |||| | ||||| || |||||||| || |||||| ||| || ||||||||||| Sbjct 466027 AGGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGG 466086 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| |||||| ||| | | ||| | || ||| | ||||| || Sbjct 466087 AATACCTTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGAC 466146 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | ||||| || || | ||||||||||| ||||||||| Sbjct 466147 CTCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCATA 466195 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| | || || ||||| ||||||| || || || ||||| || || || || Sbjct 462491 GCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGA 462550 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | || | || | ||||| || ||||| || || |||||| ||| || ||||| |||| Sbjct 462551 AAGAGTACGTCCA-TCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAG 462609 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | ||||| |||||||| |||||| ||| | | ||| | |||||| | ||||| | Sbjct 462610 GAATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGA 462669 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| | || | || || || || | ||||||||||| ||||||||| Sbjct 462670 CCTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCATA 462719 >seq38 Length=2283748 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| ||| ||||||| || || |||||||| || || || ||| Sbjct 1209419 GCCACCACGGAGACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGA 1209360 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | |||| || | ||||| ||||| || || ||| | || |||||||||||||| || | Sbjct 1209359 AAGGGTGCGTCCA-TCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGG 1209301 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | || ||||||||||| |||||| || | | || | || |||| || || | Sbjct 1209300 GAATCCCTTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAA 1209241 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | ||||| || ||||| ||||| || || |||||||| Sbjct 1209240 CCTCCAAGGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||||| || || ||||| ||||| ||||| ||| Sbjct 1208962 CCACCACGAAGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAG 1208903 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| |||||||| || ||| | || || |||||||| || || || Sbjct 1208902 AGAGTGCGACCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGA 1208843 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| |||| | || | | ||| | || |||| || || || Sbjct 1208842 ATCCCTTCTTTGTC-TTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGAC 1208784 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | ||| | |||||||| ||||| |||||||| || || |||||| Sbjct 1208783 CTCCAAGGTGATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCATA 1208735 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||| ||||| ||| ||||||| ||||| || || || || ||||| ||| Sbjct 1208734 CCACCACGTAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAA 1208675 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| || | ||||| ||||| || || || | || |||||||||||||| ||||| Sbjct 1208674 AGTGTGCGTCCA-TCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGG 1208616 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| |||||| || | | || | ||||| | || || || Sbjct 1208615 AATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGAC 1208556 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || ||||| ||||| ||||| || ||||| Sbjct 1208555 TTCCAAAGTGATGGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 |||| || | ||| ||||| || ||||||||||| ||| | || | |||||| Sbjct 1209628 ACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGTACGACCGTCTTCC 1209569 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || || ||| |||||| | |||||||| || || || || || ||||| | Sbjct 1209568 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCCTCCTTGTCTTGG 1209509 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 ||||| ||| | | ||| | ||||| | || || || || | || | |||||| Sbjct 1209508 ATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTCTTG 1209449 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||| ||||| ||||| || ||||| Sbjct 1209448 CCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| ||||||| || || |||||||| || || || || Sbjct 1209190 CCACCACGGAGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAA 1209131 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | ||||| ||||| || || ||| | || ||||||||||| || || || Sbjct 1209130 AGGGTGCGTCCA-TCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGG 1209072 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| |||||| || | | || | || |||| || || || Sbjct 1209071 AATCCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGAC 1209012 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || ||||| ||||||||||| || |||||| Sbjct 1209011 TTCCAGAGTGATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCATA 1208963 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || ||||| | || || || || || ||||| || || Sbjct 1208507 GCCACCACGGAGACGGAGTACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGA 1208448 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || | | ||| || | |||||| || || |||||| | |||||||||||||| Sbjct 1208447 CAAGGTACGCCCGTCCTCCAACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGG 1208388 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| |||||||| ||| || || | | || | ||||||| |||||||| Sbjct 1208387 GATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCAC 1208328 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | || || || |||| || || ||||| || ||||| Sbjct 1208327 CTCGAGGGTGATAGTTTTACCAGTCAGTGTCTTCACGAAGATCTGCAT 1208280 >seq365 Length=450407 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620 |||| ||| || || || ||||||||||| ||| | || | || | ||||| | ||| Sbjct 426477 TGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGATAAGGTACGTCCA-TCTTCTAACTG 426419 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 ||| ||||| | || |||||||||||||| || || || ||||||||||| ||| || Sbjct 426418 TTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTCTTTGTCTTGGATCTT 426359 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | ||| | | || | || || | || || ||||||| ||| | ||||| || || Sbjct 426358 TGCTTTGACATTCTCGATGGTATCTGACGGTTCAACCTCAAGGGTGATGGTCTTACCTGT 426299 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 ||| |||||||| || || ||||| Sbjct 426298 CAAAGTTTTTACAAAAATCTGCAT 426275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495999052820800