Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq349 230 2e-55 >seq349 Length=550016 Score = 230 bits (254), Expect = 2e-55 Identities = 502/742 (68%), Gaps = 16/742 (2%) Strand=Plus/Minus Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625 |||||||||||| ||| || || || | ||| | || || |||||||||||||| || Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 13626 TCCAGTG-ATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACA 13684 || |||| | ||| | ||| ||||| || ||||| | || || | | || ||||| Sbjct 192914 TC-AGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACA 192856 Query 13685 ACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACA 13744 ||| ||||| || || || || || | ||| || ||||| || |||| | | || Sbjct 192855 ACCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCA 192796 Query 13745 ATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACAC 13804 |||||| || || || |||| || | || || | |||||||| ||| |||| || Sbjct 192795 ATTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAAC 192736 Query 13805 AGCCTCTTTTATAATAATTGTAATAATC--TCATTAGAAGGAGGATATTTTAGATGTTTA 13862 ||| ||| || ||| | | | || || ||||| || | | |||| Sbjct 192735 AGCATCTCGAATTATACCT--ACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAG 192678 Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13922 || | || || ||||| || ||||| | || ||||||||| || | ||| || || Sbjct 192677 AACAGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAG 192618 Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG 13982 |||||||| || ||||| || ||||||||||||| ||| ||||| || || || || Sbjct 192617 AATGTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCA 192558 Query 13983 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14042 || || ||||| || || || || || || || || | | ||| || || | | || | Sbjct 192557 GAGAAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATG-TACTACT 192499 Query 14043 TTGTTCGA---TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT 14099 | |||| |||||| ||| |||||| |||| || || || | || || || Sbjct 192498 CT--TCGAGTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTC 192441 Query 14100 TCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGT 14159 ||||||||||| || | | || || | ||||| | | ||| || || || || | Sbjct 192440 TCAATAGCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAAC 192381 Query 14160 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTA 14219 | ||| |||||||| || || || || || |||||||| || |||||||||||||| | Sbjct 192380 ATGCTGTACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGT 192321 Query 14220 GCTTCCG--ACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATAC 14277 || || | ||| || ||||| | |||||||| | | ||| ||||| ||||| | Sbjct 192320 GCCTCTGTTACC--TGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTC 192263 Query 14278 CATCACTAGCTGCAAAAAATGC 14299 |||| ||| || ||||| || Sbjct 192262 CATCGGAAGCAGCGAAAAACGC 192241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479665191611600