Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq349 208 7e-49 >seq349 Length=550016 Score = 208 bits (230), Expect = 7e-49 Identities = 498/742 (67%), Gaps = 16/742 (2%) Strand=Plus/Minus Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413 |||||||||||| ||| || || || | ||| | || || || ||||||||||| || Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 13414 TCCAGTG-ATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACA 13472 || |||| | ||| | ||| |||||||| ||||| || || || | | || ||||| Sbjct 192914 TC-AGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACA 192856 Query 13473 ACCTAGTTCTAATAAT-AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCAC 13531 ||| ||||| | ||| || || || || | ||| || ||||| || |||| | | | Sbjct 192855 ACCGAGTTC-AGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGC 192797 Query 13532 AATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACA 13591 ||||||| || || || |||| || | || | | |||||||| ||| |||| | Sbjct 192796 AATTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAA 192737 Query 13592 CAGCCTCGTTTATAATAATCTTAATAATG--TCATTAGAAGGAGGATATTTTAGATGTTT 13649 |||| || || ||| | || | | || ||||| || | | |||| Sbjct 192736 CAGCATCTCGAATTATA--CCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGA 192679 Query 13650 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 13709 || | || || ||||| || ||||| | || ||||||||| || | ||| || || Sbjct 192678 GAACAGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGA 192619 Query 13710 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCC 13769 |||||||| || ||||| || ||||||||||||| ||| ||||| || ||||| || Sbjct 192618 GAATGTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCC 192559 Query 13770 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGA--TGCT 13827 || || ||||| || || || || || || || || | | ||| || || | | || Sbjct 192558 AGAGAAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACT 192499 Query 13828 TTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT 13887 || || |||||| ||| |||||| |||| || || || | || || || Sbjct 192498 CTTCGAGTT--TATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTC 192441 Query 13888 TCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGT 13947 || || |||||||| | || || | ||||| | | ||| || || || || | Sbjct 192440 TCAATAGCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAAC 192381 Query 13948 AAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTA 14007 | ||| |||||||| || || || || || |||||||| || ||||||||||| || | Sbjct 192380 ATGCTGTACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGT 192321 Query 14008 GCTTCTG--ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATAC 14065 || |||| ||| || || || | ||||||||| | | || ||||| || || | Sbjct 192320 GCCTCTGTTACC--TGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTC 192263 Query 14066 CATCACTAGCTGCAAAAAATGC 14087 |||| ||| || ||||| || Sbjct 192262 CATCGGAAGCAGCGAAAAACGC 192241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478526140761360