Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq747 111 1e-19 seq38 93.3 3e-14 >seq747 Length=644639 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | |||||| || || | |||||| | || || | ||||||||| || || Sbjct 462528 TCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAG 462587 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 ||||| ||||||||||| | || | || ||||| || ||| |||| || | Sbjct 462588 ATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTT 462647 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 | | |||||| || |||||| |||| ||| |||||||| || || || ||||| || Sbjct 462648 TCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACG 462707 Query 43099 AAAATTTGCAT 43109 ||||||||||| Sbjct 462708 AAAATTTGCAT 462718 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 42881 CGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGG 42940 |||| || | || | ||| ||||| || | || |||||||| | |||||| || | Sbjct 465966 CGCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAG 466025 Query 42941 ACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCG 43000 | || || | || || | |||||| || || || ||||| ||||||||||||| | Sbjct 466026 AAGGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAG 466085 Query 43001 GCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060 | | ||||||||| || ||| |||| || | | | || ||| || ||||| Sbjct 466086 GAATACCTTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGA 466145 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| ||| || || || || ||||| ||||| || ||||||||||| Sbjct 466146 CCTCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 >seq38 Length=2283748 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | | ||||| || | ||| ||||| || | ||||| || || Sbjct 1208507 GCCACCACGGAGACGGAGTACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGA 1208448 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| ||||| |||| ||||| ||||||||||| || ||||| | ||| ||||||| || Sbjct 1208447 CAAGGTACGCCCGTCCTCCAACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGG 1208388 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | || ||||| || |||| | || || | | | |||||| | ||| || Sbjct 1208387 GATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCAC 1208328 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || |||||||| || || || || ||||| || || |||||| Sbjct 1208327 CTCGAGGGTGATAGTTTTACCAGTCAGTGTCTTCACGAAGATCTGCATT 1208279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381320917455492