Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1096 421 9e-113 seq349 306 5e-78 >seq1096 Length=295351 Score = 421 bits (466), Expect = 9e-113 Identities = 1222/1865 (66%), Gaps = 45/1865 (2%) Strand=Plus/Minus Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCT 70851 ||||||| |||||||| || || || |||| ||| || | | ||||||||||||| Sbjct 68969 TTGTCCACGGTAAACTGGATCGGTTTGGCAGCGGGTTTTGTTCTCAAATAGTACATGCCT 68910 Query 70852 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGA 70911 || || || || | ||| ||||| || ||||| || || ||| | || Sbjct 68909 GTCTTAAGCCCCTTGCGCCAGCCGTAGAAGTGCATCGACGAGAGGACACCATATGTTGGT 68850 Query 70912 TCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 70971 | | | |||||| |||| |||||| ||||| |||||||| || | || || ||| Sbjct 68849 TTTTCGACGTGAATGTTCAAACTCTGACTCTGATCAATGAAGGCCCCACGATCGGCGGCC 68790 Query 70972 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTA-ATATC 71030 || || | |||| || || | ||| ||||| | || || |||| | |||| | || Sbjct 68789 ATATTGAGGATCACTTTCTGCGAAATCTCCCAGACCGTCTTGTAAA-TAGCTTTGAGGTC 68731 Query 71031 TTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087 ||| |||| | | ||||| || || || | | || | || |||||| || Sbjct 68730 TTCAGGAATATCAGGGACGTTCTGGATAGAACCGCAGTTGGCTAAGATTTGATTTTTCAT 68671 Query 71088 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTG 71147 | ||||| ||| | || ||| || || || | || | ||| | || |||| ||| Sbjct 68670 CGTTTCATCCCACAGGCCTCGCTCTGTCAAGTCTTTGAGCAAATGGTGGTTGACTATTTG 68611 Query 71148 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTC 71207 ||||| || || || || | ||| |||||||| || ||| || ||||| | || || Sbjct 68610 GAATTCGCCCGATAAGACCCGACGGGTGTAAATGTTTGAGGTGTAAGGTTCAATGGATTC 68551 Query 71208 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATT 71267 ||| ||||| | || |||||||| || || |||||||||||||| | | ||| || Sbjct 68550 ATTGTTTCCAAGGATCTGAGCAGTGGAAGCTGTCGGCATAGGTGCTAAAAGTAGCGAGTT 68491 Query 71268 TCTAAGACCATGTGATCGG-ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATG 71326 |||| || ||| ||| || || ||||| || | | |||||| |||||| | || Sbjct 68490 CCTAACGCCGTGTT-TCGCTATCTTTTCTTTCAGTGCTGCCCAATCCCAAAG----GCTG 68436 Query 71327 GTAC----AACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCA 71382 ||| ||| || || || ||| || || || | Sbjct 68435 GTAGGCGTAACGTCCCACATGTCATACTGTAAGATCCCTTTGCTAACGG--GA--CTACC 68380 Query 71383 TATGTAT--CGTATG-GT-CCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCC 71438 |||| || || || || | || ||| |||| ||||||||| || || | || | Sbjct 68379 ATTGTAAGACGAATAAGTGCCCTTTTGTTCTGCTATTTCACAACTTGCTTCGAGCGCAGC 68320 Query 71439 ATAATAAATGGTTTCGAAAATCTTCTTATTGAG--ATCTTGTGCTTCCGGGCTATCAAAT 71496 ||| ||||| || ||||| |||| |||||||| | |||| |||| ||| ||||| Sbjct 68319 ATAGTAAATCGTCTCGAATATCTGTTTATTGAGCAAACTTG--CTTCTTCGCTGTCAAAA 68262 Query 71497 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTG 71556 || || ||| || || || |||||||| ||||| || || || || || |||||| Sbjct 68261 GGCATCCGTAGGAGTATGAATGCATCTGCTAAACCTTGTACCCCGATTCCTATGGGTCTG 68202 Query 71557 TGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 71616 || | |||| ||| |||| ||||| || |||||| || || | ||||| |||||| Sbjct 68201 TGGCGACTATTTGAATTTTCCGCTTCCTTAACAGGATAGTAGTTCACGTCTATTATTTTA 68142 Query 71617 TTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA---TCTC 71673 | ||| ||||| || || |||| | || || | | ||| || | | || Sbjct 68141 TCGAGGTTTCTCGTTACTAATTTGGTGATGTCTTTCAACATATCAAAGTCGTAAGTTTTC 68082 Query 71674 CCATCTA---TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCA 71730 | || | || |||| || | ||| | || || | ||| || || || | || Sbjct 68081 CTGTCGGCCTTGACGAACATATTGACGGCTATCGAAGCTAAATTGCATACTGCGATTTCG 68022 Query 71731 TTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790 | | | ||||| || ||||| ||||| | |||||||| |||||||| || | | Sbjct 68021 TCCGGTGAAGTATATTCGATGATTTCCGTGCATAAATTACTACTTTTGATGGTACCAAGA 67962 Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850 || ||||| || |||||| | ||||| ||||| || || | ||| | ||||| |||||| Sbjct 67961 TTCTGTTGGTTGCTCTTTCTATTACAGGCATCTTTGTACAACATATAAGGAGTGCCAGTT 67902 Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTAT 71910 |||| || ||| | ||||| |||||||| | | | ||| | || | || |||| Sbjct 67901 TCAACTTGGGATACAATAATAGCTTTCCAAAGTTCCCTAGCTTGTACTTGTTTGATGTAA 67842 Query 71911 CTCTTTTCTCTTTCGTA-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT 71968 || || | || || || | ||| | || || || || ||||||||| || | Sbjct 67841 TTCCCCTCATTCTCATACTTCTCGTAGAGTTTC--TCAAATTCTTCTCCCCAACAATCGG 67784 Query 71969 CTAATCCAGGA--CATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCG 72026 | || ||| ||| | |||||||| | ||||| | |||| || |||||| Sbjct 67783 AAAGACCCGGAGCCATG--TGAGGACACATAAGAGACCAAACACCATTTGAATCTACTCG 67726 Query 72027 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTC 72086 |||||| || | ||| || ||||| | || ||||| |||||| | || | || || Sbjct 67725 TTTCATGAACAAATCTGGGATCCACAATGCATAAAATAAATCTCTTGCTCGGTATTCTTC 67666 Query 72087 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 72146 || || || ||||| || | || |||||| | | | ||||| |||||||||||| || Sbjct 67665 CTTGCCAGTGTTCTTCTTTAAATTAAGGAACTCGAAGACATCAGCATGCCACGGTTCTAA 67606 Query 72147 GTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 72206 |||||| || | |||| || ||||| || ||||| || || | || || || ||| | Sbjct 67605 GTATATTGCAAACGCTCCTGGTCGTTTATTGCCTCCTTGGTCGACATACCTTGCCGTGCT 67546 Query 72207 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 72266 |||| |||| ||| ||| || | | ||| || || |||| || || || | ||||| Sbjct 67545 ATTAAAAACCTTCAGCATAGGTACTAGACCGTTCGACACACCGTTAGTGCCTGCAATATA 67486 Query 72267 GCTTCCACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAG 72324 |||| |||| | |||||| || ||| | ||| || || || || ||||| Sbjct 67485 TGTTCCTTTGGCTCTGATATTGTGAACGTTG--ACACCAATACCTCCCGCTGACTTAGAA 67428 Query 72325 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 72384 || | |||||| | | | | || ||||| |||||||| || ||| | Sbjct 67427 ATATAAGCGCATTGCGCCAGGCAGTTGAAAATACCCTCAATACTATCGTCTGGCATCATT 67368 Query 72385 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 72444 || |||||||| ||||| ||| | | ||| ||||| |||||| || ||| Sbjct 67367 AGAAGAAAACAAGAAGACAATTGAGGTCTGGGAGTACCCGCGGAAAATAAAGTTGGACTT 67308 Query 72445 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 72504 ||||| || || || |||| || | | ||| || || || ||||| | ||||| || Sbjct 67307 GCGTGTGTGAAATATCTTTCCGATAACAAATTATAAGTTTCTATAGCGGCGTCTATGTCT 67248 Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564 ||| ||||| || ||||| | ||| | ||| |||||||| | |||||| ||||| Sbjct 67247 TCCCCATGAATTCCCACAGCGACTCTCATGAGCATGTGCTGAGGGCGTTCAACAATCTTC 67188 Query 72565 TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624 || ||||| | || ||||| || | |||||| ||||| || || ||||| || Sbjct 67187 CCGTTGATTTTGAGCAGATAGGAACGCTCAAGAGTTTTGAAACCGAAGTAATTGTAGGAG 67128 Query 72625 AAGTC 72629 ||||| Sbjct 67127 AAGTC 67123 >seq349 Length=550016 Score = 306 bits (338), Expect = 5e-78 Identities = 603/890 (68%), Gaps = 3/890 (0%) Strand=Plus/Minus Query 41759 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCT 41818 || ||||| ||| ||| ||||| || || || || ||||| || ||||| || || Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 41819 TCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAAT 41878 || || ||| | ||||||||| || ||||| || |||||||| |||| | | Sbjct 192914 TCAGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAA 192855 Query 41879 CCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAA 41938 || | ||||| || ||| || || |||| ||||| ||||| ||| | | ||| Sbjct 192854 CCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAA 192795 Query 41939 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 41998 |||||||| || || | || || | || | | |||||||||||||| |||| || Sbjct 192794 TTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACA 192735 Query 41999 GCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 42058 || ||| || ||| | ||| || | | |||| | | | || ||| Sbjct 192734 GCATCTCGAATTATACCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAGAAC 192675 Query 42059 ATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAAC 42118 | | || || || ||||| || | || ||||||||| || ||||| || || || Sbjct 192674 AGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAAT 192615 Query 42119 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAA 42178 || | || ||||||| ||| || ||||| ||||| ||||||| ||| || ||||| Sbjct 192614 GTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAG 192555 Query 42179 AAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCACTGT 42236 || || || |||||||| || || ||||| || | || || || || | | || Sbjct 192554 AAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTC 192495 Query 42237 CA-TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295 | | |||||| ||| ||||||||| |||||||| |||||||||| || || || Sbjct 192494 GAGTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCAATA 192435 Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA 42355 ||||| || || ||| ||||| ||| ||| ||| ||| || |||||||| | || Sbjct 192434 GCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAACATGCTG 192375 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 |||||||||||||| || || || || || || || || || || || || | ||||| Sbjct 192374 TACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGCCTCT 192315 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 || ||||| |||||| | |||| ||| ||| ||| || || |||||||| || Sbjct 192314 GTTACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATCGGAA 192255 Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTC 42535 || || |||||||| | || ||| ||| |||| |||||| | | | | | Sbjct 192254 GCAGCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAGAAAGTCTTACC 192195 Query 42536 CAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595 || | || ||||| ||||||| ||| ||||| ||| ||||||||||| ||||| || Sbjct 192194 CAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAGCTTCGGCT 192135 Query 42596 TTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | ||| || | ||| ||||| | || || || ||||| |||||||| Sbjct 192134 TCTTTGTATTTGGCCCAAATATCGGGGTACTGGATGGGGAATATAACAAA 192085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671051331100240