Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq747 125 7e-24 seq38 111 2e-19 seq233 100 3e-16 seq365 91.5 1e-13 >seq747 Length=644639 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||||| || || |||| ||||| || || || |||||||| || | Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 453102 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| |||||||||||||| ||||||||||||||||||| ||||| Sbjct 453101 AATGTACGTCCA-TCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGG 453043 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || |||||||| ||||| ||| | | ||| | || || | ||||| || Sbjct 453042 AATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGAC 452983 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | || || || || | ||||| ||||| |||||||| Sbjct 452982 CTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCAT 452935 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 142967 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 143026 || || ||||| || |||| || ||||| ||||| || ||||| || |||| | Sbjct 465977 AACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGC 466036 Query 143027 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 143086 ||||| ||||||||||| || |||||| ||| || ||||||||||| || |||||| Sbjct 466037 CCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCT 466096 Query 143087 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTC 143146 ||||| ||||| ||| | | ||| | | ||| | || || || || | || Sbjct 466097 TTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTG 466156 Query 143147 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 | ||||| || || | ||||||||||| ||||||||| Sbjct 466157 ATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCATA 466195 Score = 96.9 bits (106), Expect = 4e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 142967 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-T 143025 || || ||||| || |||| || ||||| ||||| || ||||| || | || | | Sbjct 462501 AACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAAGAGTACGT 462560 Query 143026 CGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTC 143085 | | ||||| |||||||| || || |||||| ||| || ||||| ||||| ||||| || Sbjct 462561 CCA-TCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTC 462619 Query 143086 TTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGT 143145 |||||| ||||| ||| | | ||| | ||||| | || || || || | || Sbjct 462620 TTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACCTCTAGCGT 462679 Query 143146 CACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 | || || || || | ||||||||||| ||||||||| Sbjct 462680 GATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCATA 462719 >seq38 Length=2283748 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| ||||| ||| || |||| |||||||| || || || || || ||| Sbjct 1208734 CCACCACGTAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAA 1208675 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||||| || | ||||| || || || || || | || |||||||||||||| ||||| Sbjct 1208674 AGTGTGCGTCCA-TCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGG 1208616 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||||||||| ||||| || | | || | ||||| | ||||| || Sbjct 1208615 AATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGAC 1208556 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | || || || ||||| ||||| ||||| || ||||| Sbjct 1208555 TTCCAAAGTGATGGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||||| ||| || |||| || ||||||||||| || ||||| ||| Sbjct 1209419 GCCACCACGGAGACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGA 1209360 Query 143017 CATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | |||| || | ||||| || || || || ||| | || |||||||||||||| || | Sbjct 1209359 AAGGGTGCGTCCA-TCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGG 1209301 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | || ||||||||||| ||||| || | | || | || || | ||||| | Sbjct 1209300 GAATCCCTTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAA 1209241 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | || | || | ||||| || ||||| ||||| || || |||||||| Sbjct 1209240 CCTCCAAGGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | ||| || |||| || ||||||||||| || ||||| || Sbjct 1209190 CCACCACGGAGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAA 1209131 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || | ||||| || || || || ||| | || ||||||||||| || || || Sbjct 1209130 AGGGTGCGTCCA-TCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGG 1209072 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || ||||| ||||| || | | || | || || | ||||| || Sbjct 1209071 AATCCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGAC 1209012 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | ||||| || ||||| ||||||||||| || |||||| Sbjct 1209011 TTCCAGAGTGATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCATA 1208963 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | || || |||| || |||||||| || || || || ||| Sbjct 1208962 CCACCACGAAGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAG 1208903 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||| || ||||| || ||| | || || |||||||| || || || Sbjct 1208902 AGAGTGCGACCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGA 1208843 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| |||||| || | | ||| | || || | ||||| || Sbjct 1208842 ATCCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACC 1208783 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | |||||||| ||||| |||||||| || || |||||| Sbjct 1208782 TCCAAGGTGATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCATA 1208735 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 || ||||| || | || | |||| ||| | || || || || || ||||| || ||| Sbjct 1209649 TGCCCTCCACGGAGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCG 1209590 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 | || | |||||| || || || || ||| |||||| | |||||||| || Sbjct 1209589 GAAAGGGTACGACCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGG 1209530 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || || || || ||||| ||||| ||| | | ||| | ||||| | ||||| Sbjct 1209529 GGAATCCCCTCCTTGTCTTGGATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCG 1209470 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| | ||| | ||||||||||||| ||||| ||||| || ||||| Sbjct 1209469 ACTTCCAAAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 >seq233 Length=1369072 Score = 100 bits (110), Expect = 3e-16 Identities = 160/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| |||| |||| || ||||||| ||||| || || || |||| ||| || | Sbjct 301356 CCTCCTCTTAAAAGCAATACCAAATGAAGAGTAGAGTCATTCTGGATGTAGTAGTCAGAC 301415 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||||| |||| ||||||||||||||| | ||||| |||||||||| ||||| Sbjct 301416 AATGTGCGTTCATCTTTAAGTTGTTTACCAGCAAAAATCAGGTGTTGCTGATCTGGAGGA 301475 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || | || | | | ||||| ||| | | ||| | || || | | ||| ||| Sbjct 301476 AT-CTCCCTATAGCTG-GATTTTAGCTTTCACATTTTCGATAGTATCAGATGATTCGACT 301533 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || | ||||| || || | |||||||||| |||||||| Sbjct 301534 TCTACCGTGATAGTCTTTCCCGTGAGGGTTTTTACGATAATTTGCAT 301580 >seq365 Length=450407 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| || ||||| || || ||||| || ||| | || | || | | Sbjct 426487 CAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGATAAGGTACGTCCA-T 426429 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| | ||||| ||||| | || |||||||||||||| || || || |||||||||| Sbjct 426428 CTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTCTTTGT 426369 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || ||| ||| | | || | || || | ||||| || |||| || | | Sbjct 426368 CTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACCTCAAGGGTGATGG 426309 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || ||||| |||||||| || || ||||| Sbjct 426308 TCTTACCTGTCAAAGTTTTTACAAAAATCTGCAT 426275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506948019139680