Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq349 201 2e-46 seq1096 138 2e-27 >seq349 Length=550016 Score = 201 bits (222), Expect = 2e-46 Identities = 587/884 (66%), Gaps = 34/884 (4%) Strand=Plus/Plus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 || |||||| ||| | || ||||||| | |||||| | || | || || |||||| Sbjct 192094 TTCCCCATCCAGTACCCCGATATTTGGGCCAAATACAAAGAAGCCGAAGCTTCATTTTGG 192153 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGG--AGACTCGTTTGACTG 125115 || || || || ||| | || ||||| || | | |||| ||||| || ||| Sbjct 192154 ACCACAGAGGAAGTGGATTTATCTAAGGATATGGATCACTGGGTAAGACT---TT--CTG 192208 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | | || | | || ||||| ||| || | || || || || | ||||||||||| | Sbjct 192209 ATAACGAAAGGCATTTCATATCACACGTTCTCGCGTTTTTCGCTGCTTCCGATGGAATAG 192268 Query 125176 TCAACGACAATCT-GTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTG 125233 | || || ||||| || || | ||||| ||||| ||| | | |||||| || Sbjct 192269 TAAATGAGAATCTAGTAGAAA-GATTCAGCCAAGAAGTTCAGG-TAACAGAGGCACGTTG 192326 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 |||||| || |||||||| || ||||| | || || ||||||||| | |||| Sbjct 192327 CTTTTATGGTTTCCAAATAGCTATCGAGAATATCCATTCAGAAATGTACAGCATGTTGAT 192386 Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGT 125353 || | || ||| |||||| ||| ||| || | || || || || || || || | Sbjct 192387 CGAAACTTATATTACCGATCCTAAACAAAAAGACTTCCTTTTCAATGCTATTGAGACCCT 192446 Query 125354 GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT- 125412 ||| | | | ||||| |||||| | |||| | ||||| | ||| ||| | Sbjct 192447 GCCTTGTGTTCGTAAGAAGGCTGATTGGGCTTTAAACTGGATAAACT-CGAAGAGTAGTA 192505 Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472 | | || || || | | || ||||| || ||||| || || || || || || || | Sbjct 192506 CATTCGGGGAAAGGATCATCGCCTTCGCAGCGGTAGAAGGTATATTTTTCTCTGGCAGCT 192565 Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532 | ||||| || || ||||| || || || || | ||||| || | || | ||| | Sbjct 192566 TCGCGGCTATATTCTGGCTAAAAAAACGAGGCTTAATGCCTGGCTTAACATTCTCTAATG 192625 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAAC 125591 | || || ||| |||| || || |||| || |||||||| |||||||| ||| Sbjct 192626 AATTGATCTCTAGAGATGAAGGGTTACATTGCGACTTTGCTTGCCTACTGTTCTCG---- 192681 Query 125592 TATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCC 125651 ||||| ||| | || | || | ||| | || | ||| | ||||| Sbjct 192682 TATCT-CGTACAGAAACCG--TCTAAGGATCGAGTCGTAGGTATAATTCGA---GATGCT 192735 Query 125652 GTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAAC 125711 || || |||||||| ||||| |||| || |||| || ||| | ||||| ||||| Sbjct 192736 GTTGCTATCGAACAAGAATTTCTGTCCGATGCCTTACCCGTAAGCCTCATTGGAATGAAT 192795 Query 125712 TGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGA----TCGTCTACTGTACGAGTT 125767 |||||||| |||||| |||| || || ||||| || || | | ||||| || | Sbjct 192796 TGCAAGCTCATGTGCCAGTATATCGAATTTGTCGCCGACAGGTTGCTTACTGAAC---TC 192852 Query 125768 GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATAT-CAC 125826 | ||| |||||||| ||| ||| ||||| || ||||||||||||| || | ||| Sbjct 192853 GGTTGTGAA-AAGATTTATAACTCCACTAATCCTTTCGATTTCATGACCATTATTTCCAC 192911 Query 125827 TAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 | || || || || ||||| ||||||||||| ||| |||||||| Sbjct 192912 T-GATGGCAAAACTAACTTCTTCGAGAAGAAAGTCGGCGAGTAC 192954 >seq1096 Length=295351 Score = 138 bits (152), Expect = 2e-27 Identities = 313/471 (66%), Gaps = 0/471 (0%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || ||||||||||| ||||| || | || | ||||| ||||| ||||| || || Sbjct 67567 CAAGGAGGCAATAAACGACCAGGAGCGTTTGCAATATACTTAGAACCGTGGCATGCTGAT 67626 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | | | || ||| ||||| ||||| ||||| || || Sbjct 67627 GTCTTCGAGTTCCTTAATTTAAAGAAGAACACTGGCAAGGAAGAATACCGAGCAAGAGAT 67686 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 || ||||||||| | ||| | ||||||||||||||||| || || | ||| Sbjct 67687 TTATTTTATGCATTGTGGATCCCAGATTTGTTCATGAAACGAGTAGATTCAAATGGTGTT 67746 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 ||| || ||||| || || | | || ||||| |||||||| ||||| ||||| ||| Sbjct 67747 TGGTCTCTTATGTGTCCTCACATGGCTCCGGGTCTTTCCGATTGTTGGGGAGAAGAATTT 67806 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGA 97175 ||| ||| | || ||| | ||||| ||| | | || ||| | || | Sbjct 67807 GAGAAACTCTACGAGAAGTATGAGAATGAGGGGAATTACATCAAACAAGTACAAGCTAGG 67866 Query 97176 GAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTAC 97235 ||||| ||||| || || | | || || || ||||| ||||| || || | ||| Sbjct 67867 GAACTTTGGAAAGCTATTATTGTATCCCAAGTTGAAACTGGCACTCCTTATATGTTGTAC 67926 Query 97236 AAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAAT 97295 || ||| || ||| | || |||||||||| | | || |||||||| | ||| Sbjct 67927 AAAGATGCCTGTAATAGAAAGAGCAACCAACAGAATCTTGGTACCATCAAAAGTAGTAAT 67986 Query 97296 CTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGC 97346 | ||||||||||| | || || | || |||||||| | ||||| ||| Sbjct 67987 TTATGCACGGAAATCATCGAATATACTTCACCGGACGAAATCGCAGTATGC 68037 Score = 100 bits (110), Expect = 4e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 || |||||||| |||||||||||| || || | | || ||||||| ||||| | Sbjct 68743 ATTTACAAGACGGTCTGGGAGATTTCGCAGAAAGTGATCCTCAATATGGCCGCCGATCGT 68802 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156 || | || |||||| |||||||| || || | |||| | | || || || || Sbjct 68803 GGGGCCTTCATTGATCAGAGTCAGAGTTTGAACATTCACGTCGAAAAACCAACATATGGT 68862 Query 98157 CGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTAT 98216 | | ||||| ||||| |||| ||| |||||| || ||||| |||||||||||| Sbjct 68863 GTCCTCTCGTCGATGCACTTCTACGGCTGGCGCAAGGGGCTTAAGACAGGCATGTACTAT 68922 Query 98217 CTGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 |||||||||| | || |||| | || | ||||| |||||| Sbjct 68923 TTGAGAACAAAACCCGCTGCCAAACCGATCCAGTTTACCGTGGAC 68967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740962176824240