Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq747 132 3e-26 seq365 118 8e-22 seq38 113 3e-20 >seq747 Length=644639 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 ||| || ||||| | |||||| || |||||||| || || ||||| || ||||| || Sbjct 465967 GCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGA 466026 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | | ||||||| |||||| || ||| | |||||||| ||||| ||| || Sbjct 466027 AGGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGG 466086 Query 15256 AATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 ||| ||||||||||| ||||| ||| || || ||||||| | || | || | Sbjct 466087 AATACCTTCTTTGTCCTGGATTTTAGCT-TTAACGTTTTCTATTGGGTCAGAAGGCTCGA 466145 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | |||| || ||||| ||||| || || |||||||| |||||||||||| Sbjct 466146 CCTCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCATA 466195 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| || ||||| | |||||| || |||||||| || || ||||| || ||||| || Sbjct 462490 TGCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAG 462549 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| | | | ||||| | ||||||||| ||| | |||||||| ||||| || | Sbjct 462550 AAAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAG 462609 Query 15255 GAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 |||| || |||||||| ||||| ||| || || ||||||| || || | || Sbjct 462610 GAATGCCCTCTTTGTCCTGGATTTTAGCT-TTAACGTTTTCTATTGTGTCAGAAGGCTCG 462668 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| || || |||||||| || || |||||||| |||||||||||| Sbjct 462669 ACCTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCATA 462719 Score = 109 bits (120), Expect = 4e-19 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| | || || || |||||||| || || || || |||||||| || Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAG-- 453104 Query 15197 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | ||| || | ||||| | |||||| |||||| | |||| |||||| || || | Sbjct 453103 ACAATGTACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAG 453044 Query 15255 GAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 |||| || |||||||| ||||| ||| || ||| |||| || ||||| ||| Sbjct 453043 GAATCCCCTCTTTGTCTTGGATTTTAGCT-TTCACATTTTCGATAGTATCAGATGGTTCG 452985 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| || || ||||| || || || ||||| || ||||||||||| Sbjct 452984 ACCTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCAT 452935 >seq365 Length=450407 Score = 118 bits (130), Expect = 8e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 |||||| | | ||| || || | |||||| || || || || || ||||| || ||| Sbjct 426502 GCCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGA 426443 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | |||||||| ||||| |||||| | || | |||||| || || || Sbjct 426442 TAAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGG 426383 Query 15256 AATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 || ||||||||||| || |||||| || ||| | || |||||||| ||| | Sbjct 426382 GATACCTTCTTTGTCTTGGATCTTTGCT-TTGACATTCTCGATGGTATCTGACGGTTCAA 426324 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 | || | ||| ||||| |||||||||| ||||||||||||||| ||||| || Sbjct 426323 CCTCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATGTT 426272 >seq38 Length=2283748 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || ||||| || || || || ||| ||| | | | |||||| Sbjct 1208944 ACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTCT 1208885 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | |||||||| || | || | ||||| ||||| ||||| ||||||||||| | Sbjct 1208884 AGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTGA 1208825 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 |||||| ||| || |||| || |||||| ||| || || ||||| ||||| || Sbjct 1208824 ATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTTG 1208765 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| ||||||||||| || |||||| Sbjct 1208764 CCCGTCAAGGTTTTTACAAAGATCTGCATA 1208735 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || ||||||||||| |||||||| || ||||| ||| || | | | ||||| Sbjct 1209401 AACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCTTC 1209342 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || || ||||| || | || | |||||| || || ||||| ||||||||||| Sbjct 1209341 TAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTTGTCTTG 1209282 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 |||||| ||| || | || ||||||||| ||| || || ||||| ||||| || Sbjct 1209281 GATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGATGGTCTT 1209222 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| ||||| ||||| |||||||| Sbjct 1209221 TCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 15151 TAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTC 15210 || ||| || ||||||||||| |||||||| || ||||| || || | | | || Sbjct 1209176 TAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCATC 1209117 Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270 ||||| || ||||| || | || | |||||| ||||| ||||| || || ||||| Sbjct 1209116 TTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTC 1209057 Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 |||||| ||| || | || ||||||||| ||| || || | || ||||| Sbjct 1209056 TTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGTGATGGT 1208997 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||| |||||||| || || |||||| Sbjct 1208996 CTTTCCCGTCAAGGTTTTTACGAAGATCTGCATA 1208963 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || ||||| || || || || || || || || ||| || | | | ||||| Sbjct 1208717 AACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCCATCTTC 1208658 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || || ||||| ||| | || | |||||| || || ||||| ||||||||||| Sbjct 1208657 TAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTG 1208598 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 |||||| ||| ||| | || ||||| || ||| || || || || |||||||| Sbjct 1208597 GATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTTTT 1208538 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| ||||| || || || ||||| Sbjct 1208537 CCCCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362132967146034